Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF549Q6P9A3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
ZNF549Q6P9A3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF549Q6P9A3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.77■□□□□ 0.91
ZNF549Q6P9A3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF549Q6P9A3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 AC079140.4-201ENST00000507448 529 ntBASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 AC061975.6-201ENST00000579045 1553 ntBASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF549Q6P9A3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF549Q6P9A3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 KRT87P-202ENST00000534226 1464 ntBASIC20.74■□□□□ 0.91
ZNF549Q6P9A3 LINC02228-203ENST00000641970 1355 ntBASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF549Q6P9A3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms