Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.04■□□□□ 0.64
NIPAL3Q6P499 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 AL049796.1-201ENST00000565336 1766 ntBASIC19.04■□□□□ 0.64
NIPAL3Q6P499 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NIPAL3Q6P499 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NIPAL3Q6P499 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 AC009237.3-201ENST00000393279 1427 ntBASIC19.02■□□□□ 0.64
NIPAL3Q6P499 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NIPAL3Q6P499 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.02■□□□□ 0.63
NIPAL3Q6P499 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 AC003102.1-202ENST00000563394 1796 ntBASIC19.01■□□□□ 0.63
NIPAL3Q6P499 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NIPAL3Q6P499 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19■□□□□ 0.63
NIPAL3Q6P499 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19■□□□□ 0.63
NIPAL3Q6P499 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
NIPAL3Q6P499 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19■□□□□ 0.63
NIPAL3Q6P499 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19■□□□□ 0.63
NIPAL3Q6P499 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19■□□□□ 0.63
NIPAL3Q6P499 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19■□□□□ 0.63
NIPAL3Q6P499 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms