Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 KRT8P10-201ENST00000450021 1447 ntBASIC11.38□□□□□ -0.59
RNF213Q63HN8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.38□□□□□ -0.59
RNF213Q63HN8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RNF213Q63HN8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF213Q63HN8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RNF213Q63HN8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 AL691432.3-201ENST00000621860 400 ntBASIC11.36□□□□□ -0.59
RNF213Q63HN8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF213Q63HN8 AC022898.2-201ENST00000616822 1312 ntBASIC11.36□□□□□ -0.59
RNF213Q63HN8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 AC093458.2-201ENST00000623150 629 ntBASIC11.35□□□□□ -0.59
RNF213Q63HN8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 AC087633.2-202ENST00000565166 1439 ntBASIC11.35□□□□□ -0.59
RNF213Q63HN8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 AC079598.2-202ENST00000546624 1451 ntBASIC11.35□□□□□ -0.59
RNF213Q63HN8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 AL845331.1-201ENST00000424978 1190 ntBASIC11.35□□□□□ -0.59
RNF213Q63HN8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC11.35□□□□□ -0.59
RNF213Q63HN8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RNF213Q63HN8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RNF213Q63HN8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RNF213Q63HN8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms