Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 KRT18P20-201ENST00000548986 1279 ntBASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39BQ5VTQ0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.8■■□□□ 1.08
TTC39BQ5VTQ0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39BQ5VTQ0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39BQ5VTQ0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 AC008175.2-201ENST00000612840 297 ntBASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39BQ5VTQ0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 AC004911.1-201ENST00000416316 871 ntBASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms