Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.59■□□□□ 0.25
Q56UQ5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.59■□□□□ 0.25
Q56UQ5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 AL355001.2-201ENST00000620617 1191 ntBASIC16.59■□□□□ 0.25
Q56UQ5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Q56UQ5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Q56UQ5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.59■□□□□ 0.25
Q56UQ5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q56UQ5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q56UQ5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Q56UQ5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Q56UQ5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Q56UQ5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q56UQ5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
Q56UQ5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q56UQ5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.58■□□□□ 0.25
Q56UQ5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Q56UQ5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q56UQ5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q56UQ5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q56UQ5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Q56UQ5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.58■□□□□ 0.24
Q56UQ5 AC133561.4-201ENST00000566112 224 ntBASIC16.58■□□□□ 0.24
Q56UQ5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.58■□□□□ 0.24
Q56UQ5 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.58■□□□□ 0.24
Q56UQ5 AC110285.6-201ENST00000617652 491 ntBASIC16.58■□□□□ 0.24
Q56UQ5 AC105233.4-201ENST00000642045 216 ntBASIC16.58■□□□□ 0.24
Q56UQ5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q56UQ5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Q56UQ5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Q56UQ5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q56UQ5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Q56UQ5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q56UQ5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Q56UQ5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Q56UQ5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 AP006587.3-201ENST00000525742 1516 ntBASIC16.57■□□□□ 0.24
Q56UQ5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.57■□□□□ 0.24
Q56UQ5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Q56UQ5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 AP001330.3-201ENST00000520123 633 ntBASIC16.57■□□□□ 0.24
Q56UQ5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.57■□□□□ 0.24
Q56UQ5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 AF213884.3-201ENST00000563833 479 ntBASIC16.57■□□□□ 0.24
Q56UQ5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.57■□□□□ 0.24
Q56UQ5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.57■□□□□ 0.24
Q56UQ5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.57■□□□□ 0.24
Q56UQ5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Q56UQ5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q56UQ5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.57■□□□□ 0.24
Q56UQ5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
Q56UQ5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.56■□□□□ 0.24
Q56UQ5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.56■□□□□ 0.24
Q56UQ5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.56■□□□□ 0.24
Q56UQ5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Q56UQ5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.56■□□□□ 0.24
Q56UQ5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q56UQ5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms