Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 PFY1YOR122C 381 nt3.3□□□□□ -1.88
PDH1Q12428 YPR022CYPR022C 3402 nt3.3□□□□□ -1.88
PDH1Q12428 SWI1YPL016W 3945 nt3.3□□□□□ -1.88
PDH1Q12428 PAM1YDR251W 2493 nt3.29□□□□□ -1.88
PDH1Q12428 SIN3YOL004W 4611 nt3.29□□□□□ -1.88
PDH1Q12428 YDR170W-AYDR170W-A 1323 nt3.29□□□□□ -1.88
PDH1Q12428 YMR046CYMR046C 1323 nt3.29□□□□□ -1.88
PDH1Q12428 YDL050CYDL050C 372 nt3.29□□□□□ -1.88
PDH1Q12428 MRPL11YDL202W 750 nt3.29□□□□□ -1.88
PDH1Q12428 RSM18YER050C 417 nt3.29□□□□□ -1.88
PDH1Q12428 YGR107WYGR107W 450 nt3.29□□□□□ -1.88
PDH1Q12428 COG2YGR120C 789 nt3.29□□□□□ -1.88
PDH1Q12428 EFG1YGR271C-A 702 nt3.29□□□□□ -1.88
PDH1Q12428 RNR2YJL026W 1200 nt3.29□□□□□ -1.88
PDH1Q12428 YJL133C-AYJL133C-A 225 nt3.29□□□□□ -1.88
PDH1Q12428 YMR141CYMR141C 309 nt3.29□□□□□ -1.88
PDH1Q12428 SSN8YNL025C 972 nt3.29□□□□□ -1.88
PDH1Q12428 YOR283WYOR283W 693 nt3.29□□□□□ -1.88
PDH1Q12428 21S_rRNA21S_rRNA 3296 nt3.29□□□□□ -1.88
PDH1Q12428 GYL1YMR192W 2163 nt3.28□□□□□ -1.88
PDH1Q12428 YJL049WYJL049W 1353 nt3.28□□□□□ -1.88
PDH1Q12428 ENA5YDR038C 3276 nt3.28□□□□□ -1.88
PDH1Q12428 ENA2YDR039C 3276 nt3.28□□□□□ -1.88
PDH1Q12428 ENA1YDR040C 3276 nt3.28□□□□□ -1.88
PDH1Q12428 YCG1YDR325W 3108 nt3.28□□□□□ -1.88
PDH1Q12428 YPD1YDL235C 504 nt3.28□□□□□ -1.88
PDH1Q12428 KEI1YDR367W 666 nt3.28□□□□□ -1.88
PDH1Q12428 RPS8BYER102W 603 nt3.28□□□□□ -1.88
PDH1Q12428 VFA1YER128W 612 nt3.28□□□□□ -1.88
PDH1Q12428 SMX2YFL017W-A 234 nt3.28□□□□□ -1.88
PDH1Q12428 MND1YGL183C 660 nt3.28□□□□□ -1.88
PDH1Q12428 PRP21YJL203W 843 nt3.28□□□□□ -1.88
PDH1Q12428 RPC37YKR025W 849 nt3.28□□□□□ -1.88
PDH1Q12428 YLR154C-HYLR154C-H 132 nt3.28□□□□□ -1.88
PDH1Q12428 YLR156C-AYLR156C-A 132 nt3.28□□□□□ -1.88
PDH1Q12428 YLR157C-CYLR157C-C 132 nt3.28□□□□□ -1.88
PDH1Q12428 YLR159C-AYLR159C-A 132 nt3.28□□□□□ -1.88
PDH1Q12428 RPS8AYBL072C 603 nt3.28□□□□□ -1.88
PDH1Q12428 MIX23YBL107C 591 nt3.28□□□□□ -1.88
PDH1Q12428 YBR201C-AYBR201C-A 204 nt3.28□□□□□ -1.88
PDH1Q12428 MPS1YDL028C 2295 nt3.28□□□□□ -1.88
PDH1Q12428 POL3YDL102W 3294 nt3.28□□□□□ -1.88
PDH1Q12428 YJR030CYJR030C 2238 nt3.28□□□□□ -1.88
PDH1Q12428 MNT3YIL014W 1893 nt3.28□□□□□ -1.88
PDH1Q12428 RNT1YMR239C 1416 nt3.27□□□□□ -1.89
PDH1Q12428 TFC1YBR123C 1950 nt3.27□□□□□ -1.89
PDH1Q12428 YFL002W-BYFL002W-B 1317 nt3.27□□□□□ -1.89
PDH1Q12428 YGR161W-AYGR161W-A 1317 nt3.27□□□□□ -1.89
PDH1Q12428 YBL100W-AYBL100W-A 1317 nt3.27□□□□□ -1.89
PDH1Q12428 YCL020WYCL020W 1317 nt3.27□□□□□ -1.89
PDH1Q12428 CRD1YDL142C 852 nt3.27□□□□□ -1.89
PDH1Q12428 OCA6YDR067C 675 nt3.27□□□□□ -1.89
PDH1Q12428 YHR214C-DYHR214C-D 294 nt3.27□□□□□ -1.89
PDH1Q12428 IST3YIR005W 447 nt3.27□□□□□ -1.89
PDH1Q12428 YIR040CYIR040C 333 nt3.27□□□□□ -1.89
PDH1Q12428 ATG27YJL178C 816 nt3.27□□□□□ -1.89
PDH1Q12428 RPA12YJR063W 378 nt3.27□□□□□ -1.89
PDH1Q12428 YKL115CYKL115C 393 nt3.27□□□□□ -1.89
PDH1Q12428 SDS22YKL193C 1017 nt3.27□□□□□ -1.89
PDH1Q12428 YAR069CYAR069C 294 nt3.27□□□□□ -1.89
PDH1Q12428 YNL109WYNL109W 546 nt3.27□□□□□ -1.89
PDH1Q12428 GIM3YNL153C 390 nt3.27□□□□□ -1.89
PDH1Q12428 DAN4YJR151C 3486 nt3.27□□□□□ -1.89
PDH1Q12428 TPO5YKL174C 1857 nt3.26□□□□□ -1.89
PDH1Q12428 SPP382YLR424W 2127 nt3.26□□□□□ -1.89
PDH1Q12428 snR68snR68 136 nt3.26□□□□□ -1.89
PDH1Q12428 YDR526CYDR526C 471 nt3.26□□□□□ -1.89
PDH1Q12428 PRE1YER012W 597 nt3.26□□□□□ -1.89
PDH1Q12428 COBQ0105 1158 nt3.26□□□□□ -1.89
PDH1Q12428 PPX1YHR201C 1194 nt3.26□□□□□ -1.89
PDH1Q12428 SFT1YKL006C-A 294 nt3.26□□□□□ -1.89
PDH1Q12428 TDA8YAL064C-A 381 nt3.26□□□□□ -1.89
PDH1Q12428 RPL15AYLR029C 615 nt3.26□□□□□ -1.89
PDH1Q12428 ATP11YNL315C 957 nt3.26□□□□□ -1.89
PDH1Q12428 DPB3YBR278W 606 nt3.26□□□□□ -1.89
PDH1Q12428 YBP2YGL060W 1926 nt3.26□□□□□ -1.89
PDH1Q12428 SNT1YCR033W 3681 nt3.26□□□□□ -1.89
PDH1Q12428 SMC3YJL074C 3693 nt3.26□□□□□ -1.89
PDH1Q12428 NUP60YAR002W 1620 nt3.26□□□□□ -1.89
PDH1Q12428 TAF1YGR274C 3201 nt3.25□□□□□ -1.89
PDH1Q12428 CDH1YGL003C 1701 nt3.25□□□□□ -1.89
PDH1Q12428 YDR220CYDR220C 294 nt3.25□□□□□ -1.89
PDH1Q12428 YDR381C-AYDR381C-A 345 nt3.25□□□□□ -1.89
PDH1Q12428 PET54YGR222W 882 nt3.25□□□□□ -1.89
PDH1Q12428 BUD19YJL188C 309 nt3.25□□□□□ -1.89
PDH1Q12428 ATG10YLL042C 504 nt3.25□□□□□ -1.89
PDH1Q12428 RPL8BYLL045C 771 nt3.25□□□□□ -1.89
PDH1Q12428 ENV10YLR065C 546 nt3.25□□□□□ -1.89
PDH1Q12428 YOL114CYOL114C 609 nt3.25□□□□□ -1.89
PDH1Q12428 MCA1YOR197W 1299 nt3.25□□□□□ -1.89
PDH1Q12428 snR24snR24 89 nt3.25□□□□□ -1.89
PDH1Q12428 YPP1YGR198W 2454 nt3.25□□□□□ -1.89
PDH1Q12428 NOP4YPL043W 2058 nt3.24□□□□□ -1.89
PDH1Q12428 DBP10YDL031W 2988 nt3.24□□□□□ -1.89
PDH1Q12428 MUS81YDR386W 1899 nt3.24□□□□□ -1.89
PDH1Q12428 SRP68YPL243W 1800 nt3.24□□□□□ -1.89
PDH1Q12428 NSP1YJL041W 2472 nt3.24□□□□□ -1.89
PDH1Q12428 UPF3YGR072W 1164 nt3.24□□□□□ -1.89
PDH1Q12428 YKR051WYKR051W 1257 nt3.24□□□□□ -1.89
PDH1Q12428 RPS28BYLR264W 204 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms