Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC8.13□□□□□ -1.116e-9■■■□□ 17
SRSF1Q07955 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC7.6□□□□□ -1.196e-9■■■□□ 17
SRSF1Q07955 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC6.55□□□□□ -1.366e-9■■■□□ 17
SRSF1Q07955 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC6.44□□□□□ -1.386e-7■■■□□ 17
SRSF1Q07955 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.11e-26■■■□□ 17
SRSF1Q07955 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.141e-26■■■□□ 17
SRSF1Q07955 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.21e-26■■■□□ 17
SRSF1Q07955 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.281e-26■■■□□ 17
SRSF1Q07955 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.383e-6■■■□□ 17
SRSF1Q07955 SNX5-203ENST00000419004 778 ntTSL 516.77■□□□□ 0.288e-19■■■□□ 16.9
SRSF1Q07955 CHD2-226ENST00000636881 3545 ntTSL 56.69□□□□□ -1.343e-7■■■□□ 16.9
SRSF1Q07955 CLUHP3-203ENST00000431761 723 ntTSL 312.33□□□□□ -0.441e-6■■■□□ 16.9
SRSF1Q07955 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.121e-7■■■□□ 16.9
SRSF1Q07955 NOP9-203ENST00000557362 455 ntTSL 515.72■□□□□ 0.119e-8■■■□□ 16.9
SRSF1Q07955 KRI1-207ENST00000537433 671 ntTSL 318.44■□□□□ 0.541e-8■■■□□ 16.9
SRSF1Q07955 AGAP3-219ENST00000485904 683 ntTSL 318.21■□□□□ 0.511e-8■■■□□ 16.9
SRSF1Q07955 AGAP3-225ENST00000498559 581 ntTSL 217.38■□□□□ 0.371e-8■■■□□ 16.9
SRSF1Q07955 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.323e-7■■■□□ 16.9
SRSF1Q07955 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.57■□□□□ 0.243e-7■■■□□ 16.9
SRSF1Q07955 KRI1-211ENST00000543842 635 ntTSL 516.06■□□□□ 0.161e-8■■■□□ 16.9
SRSF1Q07955 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.031e-8■■■□□ 16.9
SRSF1Q07955 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.121e-8■■■□□ 16.9
SRSF1Q07955 AP1G2-218ENST00000555510 584 ntTSL 511.15□□□□□ -0.628e-20■■■□□ 16.9
SRSF1Q07955 AP1G2-228ENST00000556966 1098 ntTSL 310.95□□□□□ -0.668e-20■■■□□ 16.9
SRSF1Q07955 AGAP3-213ENST00000475145 413 ntTSL 210.85□□□□□ -0.671e-8■■■□□ 16.9
SRSF1Q07955 AP1G2-211ENST00000554477 592 ntTSL 310.23□□□□□ -0.778e-20■■■□□ 16.9
SRSF1Q07955 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.781e-8■■■□□ 16.9
SRSF1Q07955 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC9.93□□□□□ -0.821e-8■■■□□ 16.9
SRSF1Q07955 PSME2-216ENST00000561103 460 ntTSL 310.68□□□□□ -0.78e-19■■■□□ 16.9
SRSF1Q07955 ARFGAP1-208ENST00000518691 1162 ntTSL 218.5■□□□□ 0.558e-7■■■□□ 16.9
SRSF1Q07955 VWDE-202ENST00000326715 1394 ntTSL 513.58□□□□□ -0.234e-7■■■□□ 16.9
SRSF1Q07955 U2AF2-207ENST00000592867 447 ntTSL 215.56■□□□□ 0.082e-14■■■□□ 16.9
SRSF1Q07955 U2AF2-205ENST00000588850 637 ntTSL 214.42□□□□□ -0.12e-14■■■□□ 16.9
SRSF1Q07955 U2AF2-203ENST00000587196 778 ntTSL 313.89□□□□□ -0.192e-14■■■□□ 16.9
SRSF1Q07955 AP005263.1-202ENST00000578850 198 ntTSL 217.87■□□□□ 0.457e-7■■■□□ 16.9
SRSF1Q07955 ARAP1-208ENST00000452383 994 ntTSL 313.87□□□□□ -0.196e-9■■■□□ 16.8
SRSF1Q07955 ARAP1-206ENST00000427971 1101 ntTSL 513.3□□□□□ -0.286e-9■■■□□ 16.8
SRSF1Q07955 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.7■□□□□ 0.18e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.078e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-223ENST00000639150 1815 ntTSL 512.61□□□□□ -0.398e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-203ENST00000571698 2276 ntTSL 511.62□□□□□ -0.558e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC9.96□□□□□ -0.818e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-229ENST00000639531 2731 ntTSL 59.47□□□□□ -0.898e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.948e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC9.12□□□□□ -0.958e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-231ENST00000639853 1425 ntTSL 58.26□□□□□ -1.098e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-217ENST00000638269 3365 ntTSL 58.17□□□□□ -1.18e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-226ENST00000639375 3392 ntTSL 57.66□□□□□ -1.188e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.28e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-216ENST00000577114 629 ntTSL 56.67□□□□□ -1.348e-8■■■□□ 16.8
SRSF1Q07955 KANSL1-224ENST00000639279 387 ntTSL 36.13□□□□□ -1.438e-8■■■□□ 16.8
SRSF1Q07955 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.266e-12■■■□□ 16.8
SRSF1Q07955 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.546e-12■■■□□ 16.8
SRSF1Q07955 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.876e-12■■■□□ 16.8
SRSF1Q07955 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC9.23□□□□□ -0.936e-12■■■□□ 16.8
SRSF1Q07955 FOXK2-204ENST00000527313 779 ntTSL 319.56■□□□□ 0.724e-8■■■□□ 16.8
SRSF1Q07955 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.394e-8■■■□□ 16.8
SRSF1Q07955 FOXK2-206ENST00000531030 805 ntTSL 317.27■□□□□ 0.364e-8■■■□□ 16.8
SRSF1Q07955 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)15.61■□□□□ 0.094e-8■■■□□ 16.8
SRSF1Q07955 FOXK2-207ENST00000570585 756 ntTSL 313.57□□□□□ -0.244e-8■■■□□ 16.8
SRSF1Q07955 FOXK2-203ENST00000526383 786 ntTSL 513.57□□□□□ -0.244e-8■■■□□ 16.8
SRSF1Q07955 ARFGAP1-204ENST00000395285 2697 ntTSL 212.92□□□□□ -0.341e-6■■■□□ 16.8
SRSF1Q07955 SEC31A-220ENST00000507051 458 ntTSL 49.33□□□□□ -0.922e-6■■■□□ 16.8
SRSF1Q07955 SEC31A-218ENST00000506495 541 ntTSL 48.75□□□□□ -1.012e-6■■■□□ 16.8
SRSF1Q07955 SEC31A-222ENST00000507676 551 ntTSL 46.73□□□□□ -1.332e-6■■■□□ 16.8
SRSF1Q07955 SEC31A-211ENST00000503210 553 ntTSL 46.04□□□□□ -1.442e-6■■■□□ 16.8
SRSF1Q07955 AGBL3-205ENST00000470839 574 ntTSL 417.83■□□□□ 0.447e-10■■■□□ 16.8
SRSF1Q07955 AGBL3-204ENST00000455283 497 ntTSL 217.51■□□□□ 0.397e-10■■■□□ 16.8
SRSF1Q07955 AGBL3-207ENST00000494702 856 ntTSL 315.47■□□□□ 0.077e-10■■■□□ 16.8
SRSF1Q07955 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.55□□□□□ -0.567e-10■■■□□ 16.8
SRSF1Q07955 AGBL3-201ENST00000275763 2973 ntTSL 1 (best)9.16□□□□□ -0.947e-10■■■□□ 16.8
SRSF1Q07955 AGBL3-206ENST00000476700 2979 ntTSL 29.06□□□□□ -0.967e-10■■■□□ 16.8
SRSF1Q07955 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.237e-10■■■□□ 16.8
SRSF1Q07955 WDR6-214ENST00000488572 610 ntTSL 420.07■□□□□ 0.82e-6■■■□□ 16.8
SRSF1Q07955 WDR6-206ENST00000438660 852 ntTSL 517.47■□□□□ 0.392e-6■■■□□ 16.8
SRSF1Q07955 EPS8L2-225ENST00000533816 540 ntTSL 520.39■□□□□ 0.852e-10■■■□□ 16.8
SRSF1Q07955 PLK1-209ENST00000570220 910 ntTSL 316.61■□□□□ 0.253e-7■■■□□ 16.8
SRSF1Q07955 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.143e-7■■■□□ 16.8
SRSF1Q07955 PLK1-204ENST00000564202 584 ntTSL 313.96□□□□□ -0.173e-7■■■□□ 16.8
SRSF1Q07955 PLK1-202ENST00000562272 4135 ntTSL 29.41□□□□□ -0.93e-7■■■□□ 16.8
SRSF1Q07955 ARFGAP1-207ENST00000518618 1244 ntTSL 216.87■□□□□ 0.291e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-209ENST00000518794 2727 ntTSL 1 (best)13.71□□□□□ -0.211e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-205ENST00000468975 2640 ntTSL 213.17□□□□□ -0.31e-6■■■□□ 16.8
SRSF1Q07955 IST1-225ENST00000568581 503 ntTSL 515.32■□□□□ 0.049e-7■■■□□ 16.8
SRSF1Q07955 IST1-216ENST00000539186 542 ntTSL 49.63□□□□□ -0.879e-7■■■□□ 16.8
SRSF1Q07955 IST1-224ENST00000566536 612 ntTSL 28.78□□□□□ -19e-7■■■□□ 16.8
SRSF1Q07955 IST1-204ENST00000424485 521 ntTSL 47.98□□□□□ -1.139e-7■■■□□ 16.8
SRSF1Q07955 IST1-217ENST00000540296 476 ntTSL 46.61□□□□□ -1.359e-7■■■□□ 16.8
SRSF1Q07955 ARFGAP1-206ENST00000518601 905 ntTSL 512.85□□□□□ -0.351e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-214ENST00000520485 1548 ntTSL 220.11■□□□□ 0.811e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.94□□□□□ -0.021e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-221ENST00000549047 1040 ntTSL 514.41□□□□□ -0.11e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-218ENST00000523460 572 ntTSL 413.76□□□□□ -0.211e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.281e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.24□□□□□ -0.451e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.67□□□□□ -0.541e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.571e-6■■■□□ 16.8
SRSF1Q07955 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.641e-6■■■□□ 16.8
SRSF1Q07955 ANKRD11-205ENST00000562194 618 ntTSL 314.73□□□□□ -0.052e-7■■■□□ 16.8
SRSF1Q07955 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.443e-10■■■□□ 16.7
Retrieved 100 of 14,836 protein–RNA pairs in 89.9 ms