Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NKX6-1P78426 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
NKX6-1P78426 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NKX6-1P78426 LINC00565-201ENST00000562710 2331 ntBASIC18.39■□□□□ 0.53
NKX6-1P78426 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX6-1P78426 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NKX6-1P78426 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX6-1P78426 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.39■□□□□ 0.53
NKX6-1P78426 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX6-1P78426 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX6-1P78426 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX6-1P78426 AC092053.2-201ENST00000640557 1818 ntBASIC18.39■□□□□ 0.53
NKX6-1P78426 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-1P78426 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NKX6-1P78426 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX6-1P78426 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NKX6-1P78426 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.38■□□□□ 0.53
NKX6-1P78426 SLC7A5P2-201ENST00000553010 536 ntBASIC18.38■□□□□ 0.53
NKX6-1P78426 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.38■□□□□ 0.53
NKX6-1P78426 AL138781.1-201ENST00000566567 1274 ntBASIC18.38■□□□□ 0.53
NKX6-1P78426 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.38■□□□□ 0.53
NKX6-1P78426 AC104187.1-201ENST00000607510 612 ntBASIC18.38■□□□□ 0.53
NKX6-1P78426 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NKX6-1P78426 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NKX6-1P78426 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX6-1P78426 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-1P78426 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NKX6-1P78426 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX6-1P78426 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.37■□□□□ 0.53
NKX6-1P78426 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-1P78426 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-1P78426 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
NKX6-1P78426 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NKX6-1P78426 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NKX6-1P78426 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.36■□□□□ 0.53
NKX6-1P78426 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NKX6-1P78426 DUX4L16-201ENST00000555130 1264 ntBASIC18.36■□□□□ 0.53
NKX6-1P78426 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 MIR4651-201ENST00000582622 73 ntBASIC18.36■□□□□ 0.53
NKX6-1P78426 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-1P78426 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms