Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIRPAP78324 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.08■□□□□ 0.64
SIRPAP78324 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
SIRPAP78324 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIRPAP78324 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SIRPAP78324 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIRPAP78324 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIRPAP78324 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIRPAP78324 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.07■□□□□ 0.64
SIRPAP78324 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.07■□□□□ 0.64
SIRPAP78324 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.07■□□□□ 0.64
SIRPAP78324 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.07■□□□□ 0.64
SIRPAP78324 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.07■□□□□ 0.64
SIRPAP78324 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SIRPAP78324 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPAP78324 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.06■□□□□ 0.64
SIRPAP78324 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SIRPAP78324 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPAP78324 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPAP78324 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.06■□□□□ 0.64
SIRPAP78324 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.06■□□□□ 0.64
SIRPAP78324 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SIRPAP78324 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
SIRPAP78324 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SIRPAP78324 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPAP78324 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPAP78324 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 SLC25A24-204ENST00000569674 2357 ntBASIC19.05■□□□□ 0.64
SIRPAP78324 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.05■□□□□ 0.64
SIRPAP78324 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.05■□□□□ 0.64
SIRPAP78324 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SIRPAP78324 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPAP78324 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SIRPAP78324 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPAP78324 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.04■□□□□ 0.64
SIRPAP78324 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPAP78324 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.04■□□□□ 0.64
SIRPAP78324 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPAP78324 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.04■□□□□ 0.64
SIRPAP78324 KRT19P1-201ENST00000405746 1186 ntBASIC19.04■□□□□ 0.64
SIRPAP78324 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.04■□□□□ 0.64
SIRPAP78324 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.04■□□□□ 0.64
SIRPAP78324 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPAP78324 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.04■□□□□ 0.64
SIRPAP78324 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SIRPAP78324 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPAP78324 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPAP78324 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.03■□□□□ 0.64
SIRPAP78324 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 FEM1AP4-201ENST00000443167 1987 ntBASIC19.03■□□□□ 0.64
SIRPAP78324 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SIRPAP78324 AC090192.1-201ENST00000517740 490 ntBASIC19.03■□□□□ 0.64
SIRPAP78324 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.03■□□□□ 0.64
SIRPAP78324 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.03■□□□□ 0.64
SIRPAP78324 RARRES2P11-201ENST00000635158 484 ntBASIC19.03■□□□□ 0.64
SIRPAP78324 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SIRPAP78324 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.03■□□□□ 0.64
SIRPAP78324 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPAP78324 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SIRPAP78324 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SIRPAP78324 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SIRPAP78324 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SIRPAP78324 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms