Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SEC61A1P61619 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.23■□□□□ 0.51
SEC61A1P61619 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.23■□□□□ 0.51
SEC61A1P61619 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.23■□□□□ 0.51
SEC61A1P61619 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 MIR5787-201ENST00000611784 55 ntBASIC18.23■□□□□ 0.51
SEC61A1P61619 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SEC61A1P61619 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.22■□□□□ 0.51
SEC61A1P61619 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.22■□□□□ 0.51
SEC61A1P61619 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.22■□□□□ 0.51
SEC61A1P61619 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SEC61A1P61619 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 AC012414.1-201ENST00000556676 535 ntBASIC18.22■□□□□ 0.51
SEC61A1P61619 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.22■□□□□ 0.51
SEC61A1P61619 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.22■□□□□ 0.51
SEC61A1P61619 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.22■□□□□ 0.51
SEC61A1P61619 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A1P61619 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.21■□□□□ 0.51
SEC61A1P61619 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.21■□□□□ 0.51
SEC61A1P61619 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEC61A1P61619 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEC61A1P61619 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.21■□□□□ 0.51
SEC61A1P61619 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.21■□□□□ 0.51
SEC61A1P61619 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.21■□□□□ 0.51
SEC61A1P61619 AL031602.1-201ENST00000633169 911 ntBASIC18.21■□□□□ 0.51
SEC61A1P61619 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEC61A1P61619 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SEC61A1P61619 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.21■□□□□ 0.51
SEC61A1P61619 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.21■□□□□ 0.51
SEC61A1P61619 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SEC61A1P61619 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEC61A1P61619 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
SEC61A1P61619 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SEC61A1P61619 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.2■□□□□ 0.5
SEC61A1P61619 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
SEC61A1P61619 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.2■□□□□ 0.5
SEC61A1P61619 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SEC61A1P61619 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.2■□□□□ 0.5
SEC61A1P61619 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SEC61A1P61619 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEC61A1P61619 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.19■□□□□ 0.5
SEC61A1P61619 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.19■□□□□ 0.5
SEC61A1P61619 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SEC61A1P61619 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.19■□□□□ 0.5
SEC61A1P61619 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.19■□□□□ 0.5
SEC61A1P61619 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.19■□□□□ 0.5
SEC61A1P61619 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.19■□□□□ 0.5
SEC61A1P61619 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.19■□□□□ 0.5
SEC61A1P61619 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.19■□□□□ 0.5
SEC61A1P61619 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.19■□□□□ 0.5
SEC61A1P61619 AL358852.1-201ENST00000623174 1268 ntBASIC18.19■□□□□ 0.5
SEC61A1P61619 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SEC61A1P61619 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.19■□□□□ 0.5
SEC61A1P61619 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61A1P61619 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEC61A1P61619 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.18■□□□□ 0.5
SEC61A1P61619 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SEC61A1P61619 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.18■□□□□ 0.5
SEC61A1P61619 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEC61A1P61619 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
SEC61A1P61619 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms