Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.62■■□□□ 1.05
EIF3EP60228 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.62■■□□□ 1.05
EIF3EP60228 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.62■■□□□ 1.05
EIF3EP60228 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3EP60228 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
EIF3EP60228 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.61■■□□□ 1.05
EIF3EP60228 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
EIF3EP60228 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.61■■□□□ 1.05
EIF3EP60228 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.61■■□□□ 1.05
EIF3EP60228 AC142381.2-201ENST00000566120 298 ntBASIC21.61■■□□□ 1.05
EIF3EP60228 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3EP60228 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.61■■□□□ 1.05
EIF3EP60228 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
EIF3EP60228 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.6■■□□□ 1.05
EIF3EP60228 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.6■■□□□ 1.05
EIF3EP60228 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.6■■□□□ 1.05
EIF3EP60228 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.6■■□□□ 1.05
EIF3EP60228 AL354811.1-201ENST00000610286 706 ntBASIC21.6■■□□□ 1.05
EIF3EP60228 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.6■■□□□ 1.05
EIF3EP60228 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
EIF3EP60228 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.6■■□□□ 1.05
EIF3EP60228 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
EIF3EP60228 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.6■■□□□ 1.05
EIF3EP60228 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EIF3EP60228 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.6■■□□□ 1.05
EIF3EP60228 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
EIF3EP60228 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.59■■□□□ 1.05
EIF3EP60228 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
EIF3EP60228 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.59■■□□□ 1.05
EIF3EP60228 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EIF3EP60228 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EIF3EP60228 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
EIF3EP60228 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.58■■□□□ 1.05
EIF3EP60228 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EIF3EP60228 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EIF3EP60228 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.58■■□□□ 1.05
EIF3EP60228 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.58■■□□□ 1.05
EIF3EP60228 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.58■■□□□ 1.05
EIF3EP60228 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EIF3EP60228 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.58■■□□□ 1.05
EIF3EP60228 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
EIF3EP60228 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
EIF3EP60228 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
EIF3EP60228 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
EIF3EP60228 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EIF3EP60228 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EIF3EP60228 AL157384.1-201ENST00000445995 2473 ntBASIC21.57■■□□□ 1.04
EIF3EP60228 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
EIF3EP60228 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EIF3EP60228 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
EIF3EP60228 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
EIF3EP60228 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
EIF3EP60228 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EIF3EP60228 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.57■■□□□ 1.04
EIF3EP60228 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.57■■□□□ 1.04
EIF3EP60228 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.57■■□□□ 1.04
EIF3EP60228 TPRG1LP1-201ENST00000598702 760 ntBASIC21.57■■□□□ 1.04
EIF3EP60228 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.57■■□□□ 1.04
EIF3EP60228 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.57■■□□□ 1.04
EIF3EP60228 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EIF3EP60228 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
EIF3EP60228 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.57■■□□□ 1.04
EIF3EP60228 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
EIF3EP60228 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EIF3EP60228 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
EIF3EP60228 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EIF3EP60228 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EIF3EP60228 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EIF3EP60228 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.56■■□□□ 1.04
EIF3EP60228 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
EIF3EP60228 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.56■■□□□ 1.04
EIF3EP60228 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EIF3EP60228 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.56■■□□□ 1.04
EIF3EP60228 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.56■■□□□ 1.04
EIF3EP60228 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms