Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.28■□□□□ 0.68
SMIM11AP58511 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMIM11AP58511 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.28■□□□□ 0.68
SMIM11AP58511 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMIM11AP58511 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMIM11AP58511 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMIM11AP58511 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.28■□□□□ 0.68
SMIM11AP58511 GABARAPL3-202ENST00000624044 1851 ntBASIC19.28■□□□□ 0.68
SMIM11AP58511 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM11AP58511 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.28■□□□□ 0.68
SMIM11AP58511 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.27■□□□□ 0.68
SMIM11AP58511 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SMIM11AP58511 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.27■□□□□ 0.68
SMIM11AP58511 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM11AP58511 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SMIM11AP58511 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM11AP58511 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM11AP58511 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.27■□□□□ 0.68
SMIM11AP58511 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM11AP58511 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.27■□□□□ 0.68
SMIM11AP58511 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM11AP58511 SMUG1P1-201ENST00000590640 811 ntBASIC19.27■□□□□ 0.68
SMIM11AP58511 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.27■□□□□ 0.68
SMIM11AP58511 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM11AP58511 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMIM11AP58511 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMIM11AP58511 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
SMIM11AP58511 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.26■□□□□ 0.67
SMIM11AP58511 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.26■□□□□ 0.67
SMIM11AP58511 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.26■□□□□ 0.67
SMIM11AP58511 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.26■□□□□ 0.67
SMIM11AP58511 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.26■□□□□ 0.67
SMIM11AP58511 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM11AP58511 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.25■□□□□ 0.67
SMIM11AP58511 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.25■□□□□ 0.67
SMIM11AP58511 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.25■□□□□ 0.67
SMIM11AP58511 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
SMIM11AP58511 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMIM11AP58511 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 AC009237.3-201ENST00000393279 1427 ntBASIC19.25■□□□□ 0.67
SMIM11AP58511 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.25■□□□□ 0.67
SMIM11AP58511 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMIM11AP58511 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM11AP58511 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
SMIM11AP58511 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SMIM11AP58511 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMIM11AP58511 MIR4466-201ENST00000606121 54 ntBASIC19.24■□□□□ 0.67
SMIM11AP58511 AC121338.2-201ENST00000622535 1744 ntBASIC19.24■□□□□ 0.67
SMIM11AP58511 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM11AP58511 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms