Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN2P57739 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN2P57739 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
CLDN2P57739 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN2P57739 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.75■□□□□ 0.91
CLDN2P57739 AL512625.2-201ENST00000417533 625 ntBASIC20.75■□□□□ 0.91
CLDN2P57739 BX276092.2-201ENST00000417668 665 ntBASIC20.75■□□□□ 0.91
CLDN2P57739 AC073210.2-201ENST00000430369 194 ntBASIC20.75■□□□□ 0.91
CLDN2P57739 MIR4651-201ENST00000582622 73 ntBASIC20.75■□□□□ 0.91
CLDN2P57739 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLDN2P57739 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLDN2P57739 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN2P57739 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLDN2P57739 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN2P57739 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN2P57739 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN2P57739 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN2P57739 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLDN2P57739 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN2P57739 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN2P57739 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CLDN2P57739 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN2P57739 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.74■□□□□ 0.91
CLDN2P57739 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.74■□□□□ 0.91
CLDN2P57739 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN2P57739 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN2P57739 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN2P57739 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN2P57739 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN2P57739 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
CLDN2P57739 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN2P57739 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN2P57739 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN2P57739 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN2P57739 AC233723.2-201ENST00000623798 2106 ntBASIC20.73■□□□□ 0.91
CLDN2P57739 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN2P57739 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN2P57739 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN2P57739 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN2P57739 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN2P57739 RARRES2P4-201ENST00000514074 484 ntBASIC20.72■□□□□ 0.91
CLDN2P57739 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.72■□□□□ 0.91
CLDN2P57739 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN2P57739 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN2P57739 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CLDN2P57739 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN2P57739 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN2P57739 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 AC242852.2-201ENST00000615738 1807 ntBASIC20.71■□□□□ 0.91
CLDN2P57739 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 AC012676.1-201ENST00000574705 1949 ntBASIC20.71■□□□□ 0.91
CLDN2P57739 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CLDN2P57739 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN2P57739 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN2P57739 GUSBP5-202ENST00000510805 1989 ntBASIC20.71■□□□□ 0.91
CLDN2P57739 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN2P57739 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CLDN2P57739 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN2P57739 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN2P57739 AC010980.2-201ENST00000587099 1412 ntBASIC20.7■□□□□ 0.9
CLDN2P57739 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN2P57739 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms