Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CDH13P55290 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH13P55290 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH13P55290 AP001330.3-201ENST00000520123 633 ntBASIC20.48■□□□□ 0.87
CDH13P55290 AC027682.1-201ENST00000562846 899 ntBASIC20.48■□□□□ 0.87
CDH13P55290 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 LINC01006-201ENST00000333319 2292 ntBASIC20.48■□□□□ 0.87
CDH13P55290 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH13P55290 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH13P55290 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH13P55290 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CDH13P55290 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH13P55290 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDH13P55290 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH13P55290 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH13P55290 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH13P55290 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CDH13P55290 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH13P55290 AC005224.4-201ENST00000583262 1652 ntBASIC20.46■□□□□ 0.87
CDH13P55290 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH13P55290 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH13P55290 AC110285.6-201ENST00000617652 491 ntBASIC20.46■□□□□ 0.87
CDH13P55290 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH13P55290 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDH13P55290 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH13P55290 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH13P55290 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH13P55290 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CDH13P55290 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH13P55290 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
CDH13P55290 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
CDH13P55290 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH13P55290 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CDH13P55290 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH13P55290 PLK5-205ENST00000642079 1969 ntBASIC20.45■□□□□ 0.86
CDH13P55290 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH13P55290 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH13P55290 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH13P55290 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH13P55290 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH13P55290 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDH13P55290 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH13P55290 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH13P55290 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH13P55290 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CDH13P55290 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CDH13P55290 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 BX005040.4-201ENST00000637145 1518 ntBASIC20.44■□□□□ 0.86
CDH13P55290 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH13P55290 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH13P55290 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH13P55290 EDA-201ENST00000338901 1233 ntBASIC20.44■□□□□ 0.86
CDH13P55290 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH13P55290 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH13P55290 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH13P55290 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH13P55290 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH13P55290 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH13P55290 AF213884.3-201ENST00000563833 479 ntBASIC20.44■□□□□ 0.86
CDH13P55290 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH13P55290 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH13P55290 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH13P55290 LINC01521-201ENST00000504184 1943 ntBASIC20.43■□□□□ 0.86
CDH13P55290 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 FEM1AP1-201ENST00000431297 1995 ntBASIC20.43■□□□□ 0.86
CDH13P55290 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDH13P55290 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 AL355001.2-201ENST00000620617 1191 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms