Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CASP6P55212 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 AC091874.3-201ENST00000512672 1195 ntBASIC18.81■□□□□ 0.6
CASP6P55212 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP6P55212 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.81■□□□□ 0.6
CASP6P55212 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.81■□□□□ 0.6
CASP6P55212 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP6P55212 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CASP6P55212 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP6P55212 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP6P55212 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.8■□□□□ 0.6
CASP6P55212 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
CASP6P55212 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 AC083880.1-201ENST00000608266 535 ntBASIC18.8■□□□□ 0.6
CASP6P55212 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP6P55212 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP6P55212 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CASP6P55212 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP6P55212 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CASP6P55212 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP6P55212 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP6P55212 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.79■□□□□ 0.6
CASP6P55212 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.79■□□□□ 0.6
CASP6P55212 DUSP5P2-201ENST00000426873 1033 ntBASIC18.79■□□□□ 0.6
CASP6P55212 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CASP6P55212 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CASP6P55212 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP6P55212 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP6P55212 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP6P55212 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.79■□□□□ 0.6
CASP6P55212 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CASP6P55212 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP6P55212 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.79■□□□□ 0.6
CASP6P55212 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.79■□□□□ 0.6
CASP6P55212 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CASP6P55212 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP6P55212 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CASP6P55212 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP6P55212 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP6P55212 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP6P55212 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP6P55212 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP6P55212 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP6P55212 AC006058.3-201ENST00000606217 1069 ntBASIC18.78■□□□□ 0.6
CASP6P55212 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.78■□□□□ 0.6
CASP6P55212 MYC-209ENST00000641252 345 ntBASIC18.78■□□□□ 0.6
CASP6P55212 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CASP6P55212 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP6P55212 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP6P55212 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP6P55212 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
CASP6P55212 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.77■□□□□ 0.6
CASP6P55212 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.77■□□□□ 0.6
CASP6P55212 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CASP6P55212 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.77■□□□□ 0.6
CASP6P55212 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.77■□□□□ 0.6
CASP6P55212 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 AL158047.1-201ENST00000445918 881 ntBASIC18.77■□□□□ 0.6
CASP6P55212 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.77■□□□□ 0.6
CASP6P55212 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.77■□□□□ 0.6
CASP6P55212 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP6P55212 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CASP6P55212 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms