Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
NR1H2P55055 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NR1H2P55055 SUDS3P1-201ENST00000505831 966 ntBASIC19.74■□□□□ 0.75
NR1H2P55055 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NR1H2P55055 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.74■□□□□ 0.75
NR1H2P55055 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
NR1H2P55055 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.74■□□□□ 0.75
NR1H2P55055 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.73■□□□□ 0.75
NR1H2P55055 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NR1H2P55055 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.73■□□□□ 0.75
NR1H2P55055 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.73■□□□□ 0.75
NR1H2P55055 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.73■□□□□ 0.75
NR1H2P55055 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 ZNRF2P3-201ENST00000424200 374 ntBASIC19.73■□□□□ 0.75
NR1H2P55055 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.73■□□□□ 0.75
NR1H2P55055 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
NR1H2P55055 AL138724.1-201ENST00000606771 1088 ntBASIC19.73■□□□□ 0.75
NR1H2P55055 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NR1H2P55055 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NR1H2P55055 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.73■□□□□ 0.75
NR1H2P55055 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H2P55055 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NR1H2P55055 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NR1H2P55055 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 LINC01960-201ENST00000563759 1884 ntBASIC19.72■□□□□ 0.75
NR1H2P55055 AL031432.3-201ENST00000607698 485 ntBASIC19.72■□□□□ 0.75
NR1H2P55055 AC241377.3-202ENST00000626088 1088 ntBASIC19.72■□□□□ 0.75
NR1H2P55055 AC241585.3-202ENST00000628937 1088 ntBASIC19.72■□□□□ 0.75
NR1H2P55055 AC245100.8-202ENST00000629247 1058 ntBASIC19.72■□□□□ 0.75
NR1H2P55055 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H2P55055 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NR1H2P55055 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
NR1H2P55055 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.71■□□□□ 0.75
NR1H2P55055 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.71■□□□□ 0.75
NR1H2P55055 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NR1H2P55055 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.71■□□□□ 0.75
NR1H2P55055 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NR1H2P55055 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.71■□□□□ 0.75
NR1H2P55055 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.71■□□□□ 0.75
NR1H2P55055 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.71■□□□□ 0.75
NR1H2P55055 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NR1H2P55055 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.71■□□□□ 0.75
NR1H2P55055 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H2P55055 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NR1H2P55055 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
NR1H2P55055 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
NR1H2P55055 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NR1H2P55055 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 AC009102.2-201ENST00000606772 1639 ntBASIC19.7■□□□□ 0.74
NR1H2P55055 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NR1H2P55055 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.7■□□□□ 0.74
NR1H2P55055 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms