Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
THBS3P49746 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.27■□□□□ 0.35
THBS3P49746 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
THBS3P49746 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
THBS3P49746 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS3P49746 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
THBS3P49746 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS3P49746 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS3P49746 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
THBS3P49746 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS3P49746 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS3P49746 IGHV3-19-201ENST00000521488 291 ntBASIC17.26■□□□□ 0.35
THBS3P49746 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS3P49746 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
THBS3P49746 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS3P49746 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS3P49746 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
THBS3P49746 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS3P49746 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS3P49746 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
THBS3P49746 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
THBS3P49746 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS3P49746 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
THBS3P49746 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.25■□□□□ 0.35
THBS3P49746 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS3P49746 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
THBS3P49746 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.24■□□□□ 0.35
THBS3P49746 IRS3P-201ENST00000223076 1006 ntBASIC17.24■□□□□ 0.35
THBS3P49746 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
THBS3P49746 MIR5787-201ENST00000611784 55 ntBASIC17.24■□□□□ 0.35
THBS3P49746 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
THBS3P49746 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS3P49746 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
THBS3P49746 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.24■□□□□ 0.35
THBS3P49746 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.23■□□□□ 0.35
THBS3P49746 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
THBS3P49746 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
THBS3P49746 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
THBS3P49746 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
THBS3P49746 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.23■□□□□ 0.35
THBS3P49746 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS3P49746 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.22■□□□□ 0.35
THBS3P49746 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS3P49746 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.22■□□□□ 0.35
THBS3P49746 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS3P49746 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
THBS3P49746 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
THBS3P49746 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.22■□□□□ 0.35
THBS3P49746 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.22■□□□□ 0.35
THBS3P49746 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS3P49746 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS3P49746 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS3P49746 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms