Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 CTBP2-208ENST00000476817 705 ntTSL 322.7■■□□□ 1.224e-6■■■■□ 19.6
AARSP49588 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.984e-6■■■■□ 19.6
AARSP49588 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.834e-6■■■■□ 19.6
AARSP49588 CTBP2-212ENST00000530884 578 ntTSL 311.42□□□□□ -0.584e-6■■■■□ 19.6
AARSP49588 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.624e-6■■■■□ 19.6
AARSP49588 LRRC41-205ENST00000498402 2068 ntTSL 219.06■□□□□ 0.641e-6■■■■□ 19.6
AARSP49588 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.221e-6■■■■□ 19.6
AARSP49588 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.74□□□□□ -0.051e-6■■■■□ 19.6
AARSP49588 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-6■■■■□ 19.6
AARSP49588 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.671e-6■■■■□ 19.6
AARSP49588 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.441e-6■■■■□ 19.6
AARSP49588 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.41e-6■■■■□ 19.6
AARSP49588 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.56■■□□□ 1.524e-8■■■■□ 19.5
AARSP49588 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.04■□□□□ 0.964e-8■■■■□ 19.5
AARSP49588 TRIM41-208ENST00000515499 914 ntTSL 322.47■■□□□ 1.195e-8■■■■□ 19.4
AARSP49588 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.49■□□□□ 0.715e-8■■■■□ 19.4
AARSP49588 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.25e-8■■■■□ 19.4
AARSP49588 TRIM41-204ENST00000508930 3834 ntTSL 1 (best)16.09■□□□□ 0.175e-8■■■■□ 19.4
AARSP49588 UBE2J2-207ENST00000435198 1056 ntTSL 328.57■■■□□ 2.161e-7■■■■□ 19.3
AARSP49588 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.771e-7■■■■□ 19.3
AARSP49588 UBE2J2-210ENST00000464036 1256 ntTSL 325.46■■□□□ 1.671e-7■■■■□ 19.3
AARSP49588 UBE2J2-208ENST00000450390 2455 ntTSL 524.12■■□□□ 1.451e-7■■■■□ 19.3
AARSP49588 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.371e-7■■■■□ 19.3
AARSP49588 UBE2J2-209ENST00000461142 837 ntTSL 323.52■■□□□ 1.361e-7■■■■□ 19.3
AARSP49588 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.41■■□□□ 1.341e-7■■■■□ 19.3
AARSP49588 UBE2J2-214ENST00000473215 1028 ntTSL 323.25■■□□□ 1.311e-7■■■■□ 19.3
AARSP49588 UBE2J2-206ENST00000422076 643 ntTSL 522.63■■□□□ 1.211e-7■■■■□ 19.3
AARSP49588 UBE2J2-219ENST00000503294 814 ntTSL 422.63■■□□□ 1.211e-7■■■■□ 19.3
AARSP49588 UBE2J2-220ENST00000509720 472 ntTSL 320.7■□□□□ 0.91e-7■■■■□ 19.3
AARSP49588 UBE2J2-211ENST00000466752 886 ntTSL 320.47■□□□□ 0.871e-7■■■■□ 19.3
AARSP49588 UBE2J2-217ENST00000491779 611 ntTSL 220.47■□□□□ 0.871e-7■■■■□ 19.3
AARSP49588 UBE2J2-216ENST00000488418 750 ntTSL 220.41■□□□□ 0.861e-7■■■■□ 19.3
AARSP49588 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.46■□□□□ 0.711e-7■■■■□ 19.3
AARSP49588 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.92■□□□□ 0.621e-7■■■■□ 19.3
AARSP49588 UBE2J2-218ENST00000502382 530 ntTSL 417.53■□□□□ 0.41e-7■■■■□ 19.3
AARSP49588 UBE2J2-215ENST00000477894 767 ntTSL 517.22■□□□□ 0.351e-7■■■■□ 19.3
AARSP49588 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.83■■□□□ 1.254e-8■■■□□ 19.2
AARSP49588 POLR3D-204ENST00000518039 1202 ntTSL 222.07■■□□□ 1.124e-8■■■□□ 19.2
AARSP49588 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.024e-8■■■□□ 19.2
AARSP49588 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.924e-8■■■□□ 19.2
AARSP49588 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.674e-8■■■□□ 19.2
AARSP49588 C16orf58-210ENST00000568491 2422 ntTSL 217.05■□□□□ 0.324e-8■■■□□ 19.2
AARSP49588 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.294e-8■■■□□ 19.2
AARSP49588 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.284e-8■■■□□ 19.2
AARSP49588 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.194e-8■■■□□ 19.2
AARSP49588 GRIPAP1-211ENST00000619107 904 ntTSL 514.1□□□□□ -0.154e-8■■■□□ 19.2
AARSP49588 GRIPAP1-212ENST00000619149 2828 ntTSL 213.07□□□□□ -0.324e-8■■■□□ 19.2
AARSP49588 C16orf58-208ENST00000567673 766 ntTSL 212.92□□□□□ -0.344e-8■■■□□ 19.2
AARSP49588 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.464e-8■■■□□ 19.2
AARSP49588 BAZ2A-213ENST00000551759 833 ntTSL 511.68□□□□□ -0.544e-8■■■□□ 19.2
AARSP49588 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.624e-8■■■□□ 19.2
AARSP49588 BAZ2A-206ENST00000548578 1002 ntTSL 311.04□□□□□ -0.644e-8■■■□□ 19.2
AARSP49588 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.674e-8■■■□□ 19.2
AARSP49588 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.733e-6■■■□□ 19.2
AARSP49588 BAZ2A-209ENST00000549763 657 ntTSL 310.17□□□□□ -0.784e-8■■■□□ 19.2
AARSP49588 TMC6-209ENST00000588087 2384 ntTSL 223.74■■□□□ 1.398e-7■■■□□ 19.2
AARSP49588 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.07■■□□□ 1.288e-7■■■□□ 19.2
AARSP49588 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.682e-7■■■□□ 19.1
AARSP49588 C17orf99-202ENST00000451352 2404 ntTSL 216■□□□□ 0.159e-10■■■□□ 19.1
AARSP49588 C17orf99-203ENST00000586029 694 ntAPPRIS ALT2 TSL 314.36□□□□□ -0.119e-10■■■□□ 19.1
AARSP49588 C17orf99-204ENST00000586246 371 ntTSL 513.83□□□□□ -0.29e-10■■■□□ 19.1
AARSP49588 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.725e-7■■■□□ 19.1
AARSP49588 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.565e-7■■■□□ 19.1
AARSP49588 CD63-213ENST00000552164 845 ntTSL 221.08■□□□□ 0.975e-7■■■□□ 19.1
AARSP49588 CD63-211ENST00000551173 788 ntTSL 320.94■□□□□ 0.945e-7■■■□□ 19.1
AARSP49588 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.77■□□□□ 0.65e-7■■■□□ 19.1
AARSP49588 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.33■□□□□ 0.525e-7■■■□□ 19.1
AARSP49588 CD63-209ENST00000550050 829 ntTSL 516.79■□□□□ 0.285e-7■■■□□ 19.1
AARSP49588 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.165e-7■■■□□ 19.1
AARSP49588 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.145e-7■■■□□ 19.1
AARSP49588 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.79□□□□□ -0.365e-7■■■□□ 19.1
AARSP49588 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC12.74□□□□□ -0.375e-7■■■□□ 19.1
AARSP49588 CD63-205ENST00000548117 499 ntTSL 212.62□□□□□ -0.395e-7■■■□□ 19.1
AARSP49588 CD63-207ENST00000548898 727 ntTSL 2 BASIC12.62□□□□□ -0.395e-7■■■□□ 19.1
AARSP49588 CD63-216ENST00000555199 230 ntTSL 211.44□□□□□ -0.585e-7■■■□□ 19.1
AARSP49588 CD63-206ENST00000548160 648 ntTSL 2 BASIC9.96□□□□□ -0.825e-7■■■□□ 19.1
AARSP49588 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.8■□□□□ 0.927e-7■■■□□ 19.1
AARSP49588 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.797e-7■■■□□ 19.1
AARSP49588 TMC6-224ENST00000593044 3070 ntTSL 217.67■□□□□ 0.427e-7■■■□□ 19.1
AARSP49588 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.227e-7■■■□□ 19.1
AARSP49588 ZNF326-204ENST00000394583 1956 ntTSL 1 (best)19.74■□□□□ 0.757e-7■■■□□ 19
AARSP49588 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.357e-7■■■□□ 19
AARSP49588 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.217e-7■■■□□ 19
AARSP49588 AL669831.3-204ENST00000440196 1022 ntTSL 518.95■□□□□ 0.622e-9■■■□□ 18.9
AARSP49588 AL669831.3-205ENST00000641296 1127 nt18.36■□□□□ 0.532e-9■■■□□ 18.9
AARSP49588 AL669831.3-210ENST00000452176 818 ntTSL 1 (best)9.84□□□□□ -0.832e-9■■■□□ 18.9
AARSP49588 CHD4-209ENST00000542717 204 ntTSL 33.46□□□□□ -1.862e-9■■■□□ 18.9
AARSP49588 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.52■□□□□ 0.082e-8■■■□□ 18.9
AARSP49588 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC13.25□□□□□ -0.292e-8■■■□□ 18.9
AARSP49588 AC069277.1-203ENST00000414603 517 ntTSL 310.58□□□□□ -0.722e-8■■■□□ 18.9
AARSP49588 AC069277.1-204ENST00000342990 246 ntTSL 38.4□□□□□ -1.062e-8■■■□□ 18.9
AARSP49588 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.232e-6■■■□□ 18.8
AARSP49588 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.112e-6■■■□□ 18.8
AARSP49588 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.4□□□□□ -0.262e-6■■■□□ 18.8
AARSP49588 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.571e-7■■■□□ 18.8
AARSP49588 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.21e-7■■■□□ 18.8
AARSP49588 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.271e-7■■■□□ 18.8
AARSP49588 FAM178B-205ENST00000494172 592 ntTSL 319.53■□□□□ 0.722e-6■■■□□ 18.7
AARSP49588 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.04■□□□□ 0.325e-6■■■□□ 18.6
AARSP49588 ROR2-205ENST00000495386 664 ntTSL 315.21■□□□□ 0.035e-6■■■□□ 18.6
Retrieved 100 of 8,200 protein–RNA pairs in 60.9 ms