Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
UBE2AP49459 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2AP49459 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2AP49459 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2AP49459 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2AP49459 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 AL137060.1-201ENST00000618151 2648 ntBASIC13.26□□□□□ -0.29
UBE2AP49459 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 AC010542.4-201ENST00000563151 1910 ntBASIC13.25□□□□□ -0.29
UBE2AP49459 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.25□□□□□ -0.29
UBE2AP49459 BX842568.3-201ENST00000418104 571 ntBASIC13.25□□□□□ -0.29
UBE2AP49459 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.25□□□□□ -0.29
UBE2AP49459 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2AP49459 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2AP49459 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.25□□□□□ -0.29
UBE2AP49459 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
UBE2AP49459 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2AP49459 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
UBE2AP49459 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBE2AP49459 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 AP004607.7-201ENST00000527152 1677 ntBASIC13.24□□□□□ -0.29
UBE2AP49459 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 NFIC-211ENST00000641145 8399 ntBASIC13.24□□□□□ -0.29
UBE2AP49459 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
UBE2AP49459 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2AP49459 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2AP49459 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.24□□□□□ -0.29
UBE2AP49459 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2AP49459 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2AP49459 AC024257.2-201ENST00000549699 147 ntBASIC13.24□□□□□ -0.29
UBE2AP49459 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
UBE2AP49459 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.24□□□□□ -0.29
UBE2AP49459 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2AP49459 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2AP49459 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2AP49459 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.23□□□□□ -0.29
UBE2AP49459 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2AP49459 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UBE2AP49459 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
UBE2AP49459 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UBE2AP49459 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2AP49459 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms