Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SRP9P49458 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.51■□□□□ 0.55
SRP9P49458 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.51■□□□□ 0.55
SRP9P49458 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP9P49458 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SRP9P49458 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SRP9P49458 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP9P49458 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP9P49458 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SRP9P49458 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.5■□□□□ 0.55
SRP9P49458 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SRP9P49458 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SRP9P49458 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
SRP9P49458 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.5■□□□□ 0.55
SRP9P49458 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SRP9P49458 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP9P49458 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SRP9P49458 TSPY26P-201ENST00000476365 1326 ntBASIC18.49■□□□□ 0.55
SRP9P49458 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SRP9P49458 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.49■□□□□ 0.55
SRP9P49458 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.49■□□□□ 0.55
SRP9P49458 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.49■□□□□ 0.55
SRP9P49458 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP9P49458 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.48■□□□□ 0.55
SRP9P49458 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SRP9P49458 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SRP9P49458 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SRP9P49458 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 AC105265.2-201ENST00000467189 838 ntBASIC18.48■□□□□ 0.55
SRP9P49458 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.48■□□□□ 0.55
SRP9P49458 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.48■□□□□ 0.55
SRP9P49458 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.48■□□□□ 0.55
SRP9P49458 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SRP9P49458 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP9P49458 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SRP9P49458 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.47■□□□□ 0.55
SRP9P49458 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SRP9P49458 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.47■□□□□ 0.55
SRP9P49458 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.47■□□□□ 0.55
SRP9P49458 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SRP9P49458 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.47■□□□□ 0.55
SRP9P49458 OXCT2P1-201ENST00000447263 1535 ntBASIC18.47■□□□□ 0.55
SRP9P49458 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SRP9P49458 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP9P49458 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
SRP9P49458 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.47■□□□□ 0.55
SRP9P49458 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.46■□□□□ 0.55
SRP9P49458 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SRP9P49458 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SRP9P49458 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms