Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KCNC1P48547 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 TPRG1LP1-201ENST00000598702 760 ntBASIC20.57■□□□□ 0.88
KCNC1P48547 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
KCNC1P48547 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNC1P48547 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNC1P48547 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KCNC1P48547 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
KCNC1P48547 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNC1P48547 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNC1P48547 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNC1P48547 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNC1P48547 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNC1P48547 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNC1P48547 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNC1P48547 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KCNC1P48547 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNC1P48547 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.55■□□□□ 0.88
KCNC1P48547 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNC1P48547 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KCNC1P48547 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNC1P48547 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNC1P48547 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNC1P48547 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.55■□□□□ 0.88
KCNC1P48547 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.55■□□□□ 0.88
KCNC1P48547 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNC1P48547 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNC1P48547 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 LINC01006-201ENST00000333319 2292 ntBASIC20.54■□□□□ 0.88
KCNC1P48547 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNC1P48547 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNC1P48547 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
KCNC1P48547 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNC1P48547 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNC1P48547 FEM1AP1-201ENST00000431297 1995 ntBASIC20.54■□□□□ 0.88
KCNC1P48547 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNC1P48547 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KCNC1P48547 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNC1P48547 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNC1P48547 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.53■□□□□ 0.88
KCNC1P48547 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 EEF1DP3-203ENST00000566025 782 ntBASIC20.53■□□□□ 0.88
KCNC1P48547 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNC1P48547 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNC1P48547 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNC1P48547 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNC1P48547 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNC1P48547 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNC1P48547 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KCNC1P48547 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNC1P48547 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.52■□□□□ 0.88
KCNC1P48547 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
KCNC1P48547 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNC1P48547 MIR6084-201ENST00000622012 110 ntBASIC20.52■□□□□ 0.88
KCNC1P48547 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNC1P48547 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNC1P48547 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNC1P48547 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNC1P48547 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNC1P48547 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.52■□□□□ 0.87
KCNC1P48547 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNC1P48547 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNC1P48547 SLC25A24-204ENST00000569674 2357 ntBASIC20.51■□□□□ 0.87
KCNC1P48547 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
KCNC1P48547 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms