Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A3P43003 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.24■□□□□ 0.67
SLC1A3P43003 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC1A3P43003 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A3P43003 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC1A3P43003 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC1A3P43003 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC1A3P43003 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A3P43003 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A3P43003 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
SLC1A3P43003 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A3P43003 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A3P43003 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC1A3P43003 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC1A3P43003 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC1A3P43003 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC1A3P43003 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC1A3P43003 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A3P43003 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC1A3P43003 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A3P43003 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A3P43003 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC1A3P43003 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SLC1A3P43003 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A3P43003 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A3P43003 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A3P43003 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC1A3P43003 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC1A3P43003 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC1A3P43003 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC1A3P43003 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 LINC01521-201ENST00000504184 1943 ntBASIC19.2■□□□□ 0.66
SLC1A3P43003 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC1A3P43003 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC1A3P43003 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC1A3P43003 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC1A3P43003 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC1A3P43003 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A3P43003 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC1A3P43003 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A3P43003 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC1A3P43003 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC1A3P43003 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms