Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM3P40198 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM3P40198 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM3P40198 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM3P40198 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.08■□□□□ 0.32
CEACAM3P40198 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CEACAM3P40198 AC010141.2-201ENST00000452426 721 ntBASIC17.08■□□□□ 0.32
CEACAM3P40198 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.08■□□□□ 0.32
CEACAM3P40198 KRT18P20-201ENST00000548986 1279 ntBASIC17.08■□□□□ 0.32
CEACAM3P40198 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.08■□□□□ 0.32
CEACAM3P40198 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.08■□□□□ 0.32
CEACAM3P40198 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CEACAM3P40198 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM3P40198 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CEACAM3P40198 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM3P40198 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CEACAM3P40198 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM3P40198 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 KRT18P5-201ENST00000436075 1291 ntBASIC17.07■□□□□ 0.32
CEACAM3P40198 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.07■□□□□ 0.32
CEACAM3P40198 AP001160.3-201ENST00000601484 763 ntBASIC17.07■□□□□ 0.32
CEACAM3P40198 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CEACAM3P40198 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM3P40198 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM3P40198 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.06■□□□□ 0.32
CEACAM3P40198 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CEACAM3P40198 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 LINC00565-201ENST00000562710 2331 ntBASIC17.06■□□□□ 0.32
CEACAM3P40198 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.06■□□□□ 0.32
CEACAM3P40198 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.06■□□□□ 0.32
CEACAM3P40198 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CEACAM3P40198 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM3P40198 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.06■□□□□ 0.32
CEACAM3P40198 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM3P40198 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.05■□□□□ 0.32
CEACAM3P40198 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CEACAM3P40198 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CEACAM3P40198 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CEACAM3P40198 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.05■□□□□ 0.32
CEACAM3P40198 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CEACAM3P40198 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.05■□□□□ 0.32
CEACAM3P40198 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.05■□□□□ 0.32
CEACAM3P40198 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.05■□□□□ 0.32
CEACAM3P40198 AL162430.1-201ENST00000480705 870 ntBASIC17.05■□□□□ 0.32
CEACAM3P40198 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.05■□□□□ 0.32
CEACAM3P40198 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM3P40198 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
CEACAM3P40198 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CEACAM3P40198 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
CEACAM3P40198 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CEACAM3P40198 KRT18P11-201ENST00000435214 1283 ntBASIC17.04■□□□□ 0.32
CEACAM3P40198 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.04■□□□□ 0.32
CEACAM3P40198 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms