Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP11P24347 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
MMP11P24347 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP11P24347 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP11P24347 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP11P24347 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP11P24347 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP11P24347 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP11P24347 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP11P24347 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
MMP11P24347 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP11P24347 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MMP11P24347 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP11P24347 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MMP11P24347 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP11P24347 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP11P24347 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MMP11P24347 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
MMP11P24347 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP11P24347 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MMP11P24347 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP11P24347 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
MMP11P24347 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MMP11P24347 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MMP11P24347 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MMP11P24347 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP11P24347 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MMP11P24347 AC104771.1-201ENST00000603335 964 ntBASIC19.88■□□□□ 0.77
MMP11P24347 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MMP11P24347 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP11P24347 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP11P24347 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.87■□□□□ 0.77
MMP11P24347 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP11P24347 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP11P24347 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 AC007322.1-201ENST00000426983 750 ntBASIC19.87■□□□□ 0.77
MMP11P24347 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP11P24347 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.87■□□□□ 0.77
MMP11P24347 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP11P24347 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.87■□□□□ 0.77
MMP11P24347 AL109923.1-201ENST00000618799 583 ntBASIC19.87■□□□□ 0.77
MMP11P24347 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
MMP11P24347 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
MMP11P24347 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP11P24347 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP11P24347 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP11P24347 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.86■□□□□ 0.77
MMP11P24347 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.86■□□□□ 0.77
MMP11P24347 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP11P24347 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.86■□□□□ 0.77
MMP11P24347 SLC7A5P1-201ENST00000568957 537 ntBASIC19.86■□□□□ 0.77
MMP11P24347 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP11P24347 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP11P24347 AL024507.2-201ENST00000606070 2574 ntBASIC19.86■□□□□ 0.77
MMP11P24347 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms