Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.34■□□□□ 0.69
NR4A1P22736 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.34■□□□□ 0.69
NR4A1P22736 AC009086.3-201ENST00000623486 1008 ntBASIC19.34■□□□□ 0.69
NR4A1P22736 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.34■□□□□ 0.69
NR4A1P22736 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.34■□□□□ 0.69
NR4A1P22736 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NR4A1P22736 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR4A1P22736 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.33■□□□□ 0.69
NR4A1P22736 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NR4A1P22736 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR4A1P22736 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NR4A1P22736 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR4A1P22736 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR4A1P22736 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
NR4A1P22736 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NR4A1P22736 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.33■□□□□ 0.68
NR4A1P22736 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.33■□□□□ 0.68
NR4A1P22736 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NR4A1P22736 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
NR4A1P22736 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 AL020996.1-203ENST00000536896 2307 ntBASIC19.33■□□□□ 0.68
NR4A1P22736 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR4A1P22736 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR4A1P22736 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.32■□□□□ 0.68
NR4A1P22736 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
NR4A1P22736 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR4A1P22736 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
NR4A1P22736 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.32■□□□□ 0.68
NR4A1P22736 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NR4A1P22736 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.32■□□□□ 0.68
NR4A1P22736 AL136162.1-201ENST00000607711 1078 ntBASIC19.32■□□□□ 0.68
NR4A1P22736 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.32■□□□□ 0.68
NR4A1P22736 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR4A1P22736 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR4A1P22736 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR4A1P22736 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR4A1P22736 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NR4A1P22736 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NR4A1P22736 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.31■□□□□ 0.68
NR4A1P22736 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 PBX2P1-201ENST00000493219 1291 ntBASIC19.31■□□□□ 0.68
NR4A1P22736 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NR4A1P22736 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.31■□□□□ 0.68
NR4A1P22736 AL138724.1-201ENST00000606771 1088 ntBASIC19.31■□□□□ 0.68
NR4A1P22736 AC106739.1-201ENST00000617035 715 ntBASIC19.31■□□□□ 0.68
NR4A1P22736 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.31■□□□□ 0.68
NR4A1P22736 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.31■□□□□ 0.68
NR4A1P22736 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR4A1P22736 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.3■□□□□ 0.68
NR4A1P22736 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NR4A1P22736 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 AC135279.3-201ENST00000610945 1311 ntBASIC19.3■□□□□ 0.68
NR4A1P22736 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.3■□□□□ 0.68
NR4A1P22736 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NR4A1P22736 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NR4A1P22736 SERBP1P1-201ENST00000396021 1160 ntBASIC19.3■□□□□ 0.68
NR4A1P22736 AC006455.2-201ENST00000429931 906 ntBASIC19.3■□□□□ 0.68
NR4A1P22736 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.3■□□□□ 0.68
NR4A1P22736 AC133561.4-201ENST00000566112 224 ntBASIC19.3■□□□□ 0.68
NR4A1P22736 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NR4A1P22736 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.3■□□□□ 0.68
NR4A1P22736 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR4A1P22736 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NR4A1P22736 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.29■□□□□ 0.68
NR4A1P22736 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.29■□□□□ 0.68
NR4A1P22736 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.29■□□□□ 0.68
NR4A1P22736 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.29■□□□□ 0.68
NR4A1P22736 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.29■□□□□ 0.68
NR4A1P22736 AC024257.2-201ENST00000549699 147 ntBASIC19.29■□□□□ 0.68
NR4A1P22736 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms