Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.6■■□□□ 1.05
ERCC2P18074 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC2P18074 POU5F1P4-201ENST00000413175 1085 ntBASIC21.6■■□□□ 1.05
ERCC2P18074 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ERCC2P18074 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC2P18074 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ERCC2P18074 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC2P18074 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ERCC2P18074 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ERCC2P18074 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.59■■□□□ 1.05
ERCC2P18074 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ERCC2P18074 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.59■■□□□ 1.05
ERCC2P18074 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
ERCC2P18074 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.59■■□□□ 1.05
ERCC2P18074 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC2P18074 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ERCC2P18074 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.58■■□□□ 1.05
ERCC2P18074 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.58■■□□□ 1.05
ERCC2P18074 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 KRT19P1-201ENST00000405746 1186 ntBASIC21.58■■□□□ 1.05
ERCC2P18074 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC2P18074 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ERCC2P18074 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.57■■□□□ 1.04
ERCC2P18074 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 MIR935-201ENST00000401179 91 ntBASIC21.57■■□□□ 1.04
ERCC2P18074 KRT18P5-201ENST00000436075 1291 ntBASIC21.57■■□□□ 1.04
ERCC2P18074 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.57■■□□□ 1.04
ERCC2P18074 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ERCC2P18074 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC2P18074 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 AL049796.1-201ENST00000565336 1766 ntBASIC21.56■■□□□ 1.04
ERCC2P18074 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ERCC2P18074 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 SLC7A5P2-201ENST00000553010 536 ntBASIC21.56■■□□□ 1.04
ERCC2P18074 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.56■■□□□ 1.04
ERCC2P18074 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.56■■□□□ 1.04
ERCC2P18074 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.56■■□□□ 1.04
ERCC2P18074 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC2P18074 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.55■■□□□ 1.04
ERCC2P18074 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ERCC2P18074 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.55■■□□□ 1.04
ERCC2P18074 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.55■■□□□ 1.04
ERCC2P18074 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 MIR5787-201ENST00000611784 55 ntBASIC21.55■■□□□ 1.04
ERCC2P18074 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.55■■□□□ 1.04
ERCC2P18074 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.55■■□□□ 1.04
ERCC2P18074 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.55■■□□□ 1.04
ERCC2P18074 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC2P18074 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.54■■□□□ 1.04
ERCC2P18074 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.54■■□□□ 1.04
ERCC2P18074 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ERCC2P18074 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC2P18074 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC2P18074 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
ERCC2P18074 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms