Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 BX323043.1-201ENST00000641006 1765 ntBASIC20.17■□□□□ 0.82
LINGO3P0C6S8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 DUX4L19-201ENST00000557448 1267 ntBASIC20.17■□□□□ 0.82
LINGO3P0C6S8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.16■□□□□ 0.82
LINGO3P0C6S8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 MIR3181-201ENST00000578512 73 ntBASIC20.15■□□□□ 0.82
LINGO3P0C6S8 pRNA.6-201ENST00000610482 90 ntBASIC20.15■□□□□ 0.82
LINGO3P0C6S8 pRNA.5-201ENST00000612139 90 ntBASIC20.15■□□□□ 0.82
LINGO3P0C6S8 pRNA.11-201ENST00000618423 90 ntBASIC20.15■□□□□ 0.82
LINGO3P0C6S8 pRNA.13-201ENST00000619112 90 ntBASIC20.15■□□□□ 0.82
LINGO3P0C6S8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 SYT6-210ENST00000641643 1587 ntBASIC20.15■□□□□ 0.82
LINGO3P0C6S8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINGO3P0C6S8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LINGO3P0C6S8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LINGO3P0C6S8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 SMG8-203ENST00000578922 2178 ntBASIC20.14■□□□□ 0.81
LINGO3P0C6S8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINGO3P0C6S8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 SERBP1P1-201ENST00000396021 1160 ntBASIC20.13■□□□□ 0.81
LINGO3P0C6S8 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.13■□□□□ 0.81
LINGO3P0C6S8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINGO3P0C6S8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 AL138724.1-201ENST00000606771 1088 ntBASIC20.12■□□□□ 0.81
LINGO3P0C6S8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms