Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
COL4A2P08572 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.37■■□□□ 1.01
COL4A2P08572 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.36■■□□□ 1.01
COL4A2P08572 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 C11orf96-202ENST00000528572 1834 ntBASIC21.36■■□□□ 1.01
COL4A2P08572 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.36■■□□□ 1.01
COL4A2P08572 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 HLA-B-256ENST00000639848 1089 ntBASIC21.36■■□□□ 1.01
COL4A2P08572 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL4A2P08572 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.35■■□□□ 1.01
COL4A2P08572 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.35■■□□□ 1.01
COL4A2P08572 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
COL4A2P08572 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 AC007322.3-201ENST00000426526 701 ntBASIC21.35■■□□□ 1.01
COL4A2P08572 AC245052.3-201ENST00000450182 901 ntBASIC21.35■■□□□ 1.01
COL4A2P08572 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
COL4A2P08572 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL4A2P08572 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL4A2P08572 AC026471.6-201ENST00000622954 1905 ntBASIC21.34■■□□□ 1.01
COL4A2P08572 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL4A2P08572 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL4A2P08572 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A2P08572 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
COL4A2P08572 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
COL4A2P08572 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 MCRIP2P1-201ENST00000394346 511 ntBASIC21.34■■□□□ 1.01
COL4A2P08572 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.34■■□□□ 1.01
COL4A2P08572 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.34■■□□□ 1.01
COL4A2P08572 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.34■■□□□ 1.01
COL4A2P08572 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A2P08572 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A2P08572 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A2P08572 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL4A2P08572 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A2P08572 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A2P08572 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A2P08572 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A2P08572 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.33■■□□□ 1.01
COL4A2P08572 UBE2SP1-201ENST00000450587 669 ntBASIC21.33■■□□□ 1.01
COL4A2P08572 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.33■■□□□ 1.01
COL4A2P08572 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A2P08572 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL4A2P08572 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL4A2P08572 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL4A2P08572 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COL4A2P08572 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL4A2P08572 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
COL4A2P08572 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
COL4A2P08572 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL4A2P08572 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
COL4A2P08572 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A2P08572 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.32■■□□□ 1
COL4A2P08572 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A2P08572 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A2P08572 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.32■■□□□ 1
COL4A2P08572 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.32■■□□□ 1
COL4A2P08572 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.32■■□□□ 1
COL4A2P08572 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.32■■□□□ 1
COL4A2P08572 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL4A2P08572 C1QBPP2-201ENST00000528754 825 ntBASIC21.32■■□□□ 1
COL4A2P08572 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A2P08572 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A2P08572 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.31■■□□□ 1
COL4A2P08572 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 AC092368.3-202ENST00000574180 1591 ntBASIC21.31■■□□□ 1
COL4A2P08572 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.31■■□□□ 1
COL4A2P08572 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.31■■□□□ 1
COL4A2P08572 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.31■■□□□ 1
COL4A2P08572 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.31■■□□□ 1
COL4A2P08572 RPPH1-201ENST00000516869 333 ntBASIC21.31■■□□□ 1
COL4A2P08572 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
COL4A2P08572 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 AC105020.6-201ENST00000621523 1217 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms