Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.8■■□□□ 1.08
LMNAP02545 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
LMNAP02545 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LMNAP02545 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LMNAP02545 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LMNAP02545 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LMNAP02545 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LMNAP02545 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LMNAP02545 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.79■■□□□ 1.08
LMNAP02545 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
LMNAP02545 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
LMNAP02545 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.79■■□□□ 1.08
LMNAP02545 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.79■■□□□ 1.08
LMNAP02545 AL158047.1-201ENST00000445918 881 ntBASIC21.79■■□□□ 1.08
LMNAP02545 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.79■■□□□ 1.08
LMNAP02545 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LMNAP02545 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LMNAP02545 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LMNAP02545 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.78■■□□□ 1.08
LMNAP02545 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.78■■□□□ 1.08
LMNAP02545 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
LMNAP02545 MYCNOS-205ENST00000641950 531 ntBASIC21.78■■□□□ 1.08
LMNAP02545 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LMNAP02545 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LMNAP02545 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.78■■□□□ 1.08
LMNAP02545 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.78■■□□□ 1.08
LMNAP02545 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LMNAP02545 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LMNAP02545 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.77■■□□□ 1.08
LMNAP02545 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.77■■□□□ 1.08
LMNAP02545 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.77■■□□□ 1.08
LMNAP02545 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LMNAP02545 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNAP02545 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
LMNAP02545 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.76■■□□□ 1.07
LMNAP02545 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 C11orf96-202ENST00000528572 1834 ntBASIC21.76■■□□□ 1.07
LMNAP02545 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.76■■□□□ 1.07
LMNAP02545 RARRES2P4-201ENST00000514074 484 ntBASIC21.76■■□□□ 1.07
LMNAP02545 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.76■■□□□ 1.07
LMNAP02545 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 AC142381.4-202ENST00000563973 229 ntBASIC21.76■■□□□ 1.07
LMNAP02545 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LMNAP02545 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LMNAP02545 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.76■■□□□ 1.07
LMNAP02545 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNAP02545 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
LMNAP02545 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
LMNAP02545 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.75■■□□□ 1.07
LMNAP02545 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.75■■□□□ 1.07
LMNAP02545 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 MIR1224-201ENST00000408193 85 ntBASIC21.75■■□□□ 1.07
LMNAP02545 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
LMNAP02545 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.75■■□□□ 1.07
LMNAP02545 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNAP02545 LINC01529-204ENST00000636474 1715 ntBASIC21.75■■□□□ 1.07
LMNAP02545 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
LMNAP02545 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms