Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 BX664725.1-201ENST00000438252 379 ntBASIC18.13■□□□□ 0.49
HLA-DQB1P01920 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB1P01920 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB1P01920 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.11■□□□□ 0.49
HLA-DQB1P01920 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB1P01920 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 AC112907.3-201ENST00000577781 2400 ntBASIC18.1■□□□□ 0.49
HLA-DQB1P01920 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB1P01920 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 AC116562.4-201ENST00000641316 2276 ntBASIC18.09■□□□□ 0.49
HLA-DQB1P01920 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB1P01920 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms