Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-AP01891 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-AP01891 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HLA-AP01891 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-AP01891 AC006128.1-201ENST00000624704 1661 ntBASIC17.64■□□□□ 0.42
HLA-AP01891 OR7E47P-201ENST00000546390 1422 ntBASIC17.64■□□□□ 0.42
HLA-AP01891 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-AP01891 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-AP01891 TSPY9P-201ENST00000440215 945 ntBASIC17.64■□□□□ 0.41
HLA-AP01891 TSPY11P-201ENST00000442607 1045 ntBASIC17.64■□□□□ 0.41
HLA-AP01891 AC079089.2-201ENST00000531211 1277 ntBASIC17.64■□□□□ 0.41
HLA-AP01891 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-AP01891 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-AP01891 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-AP01891 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-AP01891 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-AP01891 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-AP01891 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-AP01891 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
HLA-AP01891 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-AP01891 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-AP01891 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-AP01891 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-AP01891 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-AP01891 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-AP01891 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-AP01891 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HLA-AP01891 AC087289.5-201ENST00000586076 3175 ntBASIC17.63■□□□□ 0.41
HLA-AP01891 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-AP01891 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-AP01891 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-AP01891 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-AP01891 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 AC092028.1-203ENST00000608262 953 ntBASIC17.62■□□□□ 0.41
HLA-AP01891 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-AP01891 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-AP01891 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-AP01891 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-AP01891 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-AP01891 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-AP01891 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-AP01891 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-AP01891 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.61■□□□□ 0.41
HLA-AP01891 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-AP01891 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-AP01891 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-AP01891 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
HLA-AP01891 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-AP01891 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-AP01891 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-AP01891 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms