Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NGFP01138 KRT18P5-201ENST00000436075 1291 ntBASIC18.18■□□□□ 0.5
NGFP01138 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.18■□□□□ 0.5
NGFP01138 AC138907.5-202ENST00000569484 235 ntBASIC18.18■□□□□ 0.5
NGFP01138 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.18■□□□□ 0.5
NGFP01138 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.18■□□□□ 0.5
NGFP01138 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
NGFP01138 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NGFP01138 AC061975.6-201ENST00000579045 1553 ntBASIC18.17■□□□□ 0.5
NGFP01138 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.17■□□□□ 0.5
NGFP01138 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.17■□□□□ 0.5
NGFP01138 AL137060.1-201ENST00000618151 2648 ntBASIC18.17■□□□□ 0.5
NGFP01138 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.17■□□□□ 0.5
NGFP01138 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NGFP01138 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.17■□□□□ 0.5
NGFP01138 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NGFP01138 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NGFP01138 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NGFP01138 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NGFP01138 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.17■□□□□ 0.5
NGFP01138 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NGFP01138 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.16■□□□□ 0.5
NGFP01138 AF106564.1-201ENST00000607058 2553 ntBASIC18.16■□□□□ 0.5
NGFP01138 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.16■□□□□ 0.5
NGFP01138 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
NGFP01138 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.16■□□□□ 0.5
NGFP01138 AL162430.1-201ENST00000480705 870 ntBASIC18.16■□□□□ 0.5
NGFP01138 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.16■□□□□ 0.5
NGFP01138 AP001160.3-201ENST00000601484 763 ntBASIC18.16■□□□□ 0.5
NGFP01138 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NGFP01138 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.16■□□□□ 0.5
NGFP01138 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NGFP01138 AL024507.2-201ENST00000606070 2574 ntBASIC18.16■□□□□ 0.5
NGFP01138 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NGFP01138 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NGFP01138 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.15■□□□□ 0.5
NGFP01138 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NGFP01138 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.15■□□□□ 0.5
NGFP01138 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 AC010141.2-201ENST00000452426 721 ntBASIC18.15■□□□□ 0.5
NGFP01138 AC092666.2-201ENST00000613287 246 ntBASIC18.15■□□□□ 0.5
NGFP01138 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NGFP01138 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.15■□□□□ 0.5
NGFP01138 FEM1AP4-201ENST00000443167 1987 ntBASIC18.15■□□□□ 0.5
NGFP01138 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NGFP01138 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.14■□□□□ 0.5
NGFP01138 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.14■□□□□ 0.5
NGFP01138 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NGFP01138 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NGFP01138 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NGFP01138 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.14■□□□□ 0.49
NGFP01138 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NGFP01138 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.14■□□□□ 0.49
NGFP01138 KRT19P1-201ENST00000405746 1186 ntBASIC18.14■□□□□ 0.49
NGFP01138 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.14■□□□□ 0.49
NGFP01138 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NGFP01138 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.14■□□□□ 0.49
NGFP01138 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NGFP01138 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NGFP01138 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NGFP01138 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NGFP01138 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NGFP01138 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.13■□□□□ 0.49
NGFP01138 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NGFP01138 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NGFP01138 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.13■□□□□ 0.49
NGFP01138 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
NGFP01138 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.13■□□□□ 0.49
NGFP01138 AC008175.2-201ENST00000612840 297 ntBASIC18.13■□□□□ 0.49
NGFP01138 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.13■□□□□ 0.49
NGFP01138 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NGFP01138 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms