Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
PTP4A3O75365 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTP4A3O75365 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTP4A3O75365 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.9■□□□□ 0.62
PTP4A3O75365 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A3O75365 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.9■□□□□ 0.62
PTP4A3O75365 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.9■□□□□ 0.62
PTP4A3O75365 AP001330.3-201ENST00000520123 633 ntBASIC18.9■□□□□ 0.62
PTP4A3O75365 AL355001.2-201ENST00000620617 1191 ntBASIC18.9■□□□□ 0.62
PTP4A3O75365 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A3O75365 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A3O75365 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A3O75365 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTP4A3O75365 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.9■□□□□ 0.62
PTP4A3O75365 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.89■□□□□ 0.62
PTP4A3O75365 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTP4A3O75365 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTP4A3O75365 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTP4A3O75365 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.89■□□□□ 0.61
PTP4A3O75365 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.89■□□□□ 0.61
PTP4A3O75365 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.89■□□□□ 0.61
PTP4A3O75365 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.89■□□□□ 0.61
PTP4A3O75365 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.89■□□□□ 0.61
PTP4A3O75365 RASA4CP-201ENST00000424092 1398 ntBASIC18.89■□□□□ 0.61
PTP4A3O75365 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A3O75365 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.88■□□□□ 0.61
PTP4A3O75365 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.88■□□□□ 0.61
PTP4A3O75365 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PTP4A3O75365 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A3O75365 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.88■□□□□ 0.61
PTP4A3O75365 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A3O75365 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A3O75365 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.88■□□□□ 0.61
PTP4A3O75365 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PTP4A3O75365 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A3O75365 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PTP4A3O75365 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A3O75365 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A3O75365 MIR939-201ENST00000401314 82 ntBASIC18.87■□□□□ 0.61
PTP4A3O75365 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A3O75365 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A3O75365 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.87■□□□□ 0.61
PTP4A3O75365 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A3O75365 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A3O75365 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.87■□□□□ 0.61
PTP4A3O75365 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.87■□□□□ 0.61
PTP4A3O75365 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PTP4A3O75365 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.87■□□□□ 0.61
PTP4A3O75365 AL031432.3-201ENST00000607698 485 ntBASIC18.87■□□□□ 0.61
PTP4A3O75365 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.87■□□□□ 0.61
PTP4A3O75365 AC110285.6-201ENST00000617652 491 ntBASIC18.87■□□□□ 0.61
PTP4A3O75365 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A3O75365 AC121338.2-201ENST00000622535 1744 ntBASIC18.87■□□□□ 0.61
PTP4A3O75365 AL136967.2-201ENST00000623968 743 ntBASIC18.87■□□□□ 0.61
PTP4A3O75365 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A3O75365 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A3O75365 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.86■□□□□ 0.61
PTP4A3O75365 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.86■□□□□ 0.61
PTP4A3O75365 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A3O75365 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.86■□□□□ 0.61
PTP4A3O75365 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.86■□□□□ 0.61
PTP4A3O75365 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PTP4A3O75365 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTP4A3O75365 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
PTP4A3O75365 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.85■□□□□ 0.61
PTP4A3O75365 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.85■□□□□ 0.61
PTP4A3O75365 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.85■□□□□ 0.61
PTP4A3O75365 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.85■□□□□ 0.61
PTP4A3O75365 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms