Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SCN2BO60939 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 AC005224.4-201ENST00000583262 1652 ntBASIC19.87■□□□□ 0.77
SCN2BO60939 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SCN2BO60939 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SCN2BO60939 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SCN2BO60939 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.87■□□□□ 0.77
SCN2BO60939 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 TSPY26P-201ENST00000476365 1326 ntBASIC19.87■□□□□ 0.77
SCN2BO60939 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 PBX2P1-201ENST00000493219 1291 ntBASIC19.87■□□□□ 0.77
SCN2BO60939 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.87■□□□□ 0.77
SCN2BO60939 AC105233.4-201ENST00000642045 216 ntBASIC19.87■□□□□ 0.77
SCN2BO60939 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN2BO60939 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SCN2BO60939 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN2BO60939 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN2BO60939 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 AP001330.3-201ENST00000520123 633 ntBASIC19.86■□□□□ 0.77
SCN2BO60939 AC027682.1-201ENST00000562846 899 ntBASIC19.86■□□□□ 0.77
SCN2BO60939 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.86■□□□□ 0.77
SCN2BO60939 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SCN2BO60939 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN2BO60939 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SCN2BO60939 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN2BO60939 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN2BO60939 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 LINC01521-201ENST00000504184 1943 ntBASIC19.85■□□□□ 0.77
SCN2BO60939 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SCN2BO60939 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.85■□□□□ 0.77
SCN2BO60939 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.85■□□□□ 0.77
SCN2BO60939 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN2BO60939 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SCN2BO60939 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN2BO60939 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 FEM1AP1-201ENST00000431297 1995 ntBASIC19.84■□□□□ 0.77
SCN2BO60939 PLK5-205ENST00000642079 1969 ntBASIC19.84■□□□□ 0.77
SCN2BO60939 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SCN2BO60939 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 EDA-201ENST00000338901 1233 ntBASIC19.84■□□□□ 0.77
SCN2BO60939 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SCN2BO60939 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.84■□□□□ 0.77
SCN2BO60939 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.84■□□□□ 0.77
SCN2BO60939 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCN2BO60939 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.84■□□□□ 0.77
SCN2BO60939 AL031432.3-201ENST00000607698 485 ntBASIC19.84■□□□□ 0.77
SCN2BO60939 BX005040.4-201ENST00000637145 1518 ntBASIC19.84■□□□□ 0.77
SCN2BO60939 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.84■□□□□ 0.77
SCN2BO60939 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.84■□□□□ 0.77
SCN2BO60939 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN2BO60939 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN2BO60939 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SCN2BO60939 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SCN2BO60939 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.83■□□□□ 0.77
SCN2BO60939 SLC25A24-204ENST00000569674 2357 ntBASIC19.83■□□□□ 0.77
SCN2BO60939 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SCN2BO60939 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.83■□□□□ 0.77
SCN2BO60939 MIR572-201ENST00000384983 95 ntBASIC19.83■□□□□ 0.77
SCN2BO60939 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.83■□□□□ 0.77
SCN2BO60939 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.83■□□□□ 0.77
SCN2BO60939 AC110285.6-201ENST00000617652 491 ntBASIC19.83■□□□□ 0.77
SCN2BO60939 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SCN2BO60939 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCN2BO60939 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCN2BO60939 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN2BO60939 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.83■□□□□ 0.76
SCN2BO60939 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
SCN2BO60939 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SCN2BO60939 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms