Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.47■□□□□ 0.55
SGCEO43556 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SGCEO43556 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.47■□□□□ 0.55
SGCEO43556 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGCEO43556 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.47■□□□□ 0.55
SGCEO43556 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SGCEO43556 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.46■□□□□ 0.55
SGCEO43556 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.46■□□□□ 0.55
SGCEO43556 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.46■□□□□ 0.55
SGCEO43556 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
SGCEO43556 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
SGCEO43556 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.46■□□□□ 0.55
SGCEO43556 AL137060.1-201ENST00000618151 2648 ntBASIC18.46■□□□□ 0.55
SGCEO43556 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGCEO43556 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
SGCEO43556 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
SGCEO43556 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SGCEO43556 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SGCEO43556 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SGCEO43556 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SGCEO43556 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.45■□□□□ 0.54
SGCEO43556 AL391422.3-201ENST00000603791 2761 ntBASIC18.45■□□□□ 0.54
SGCEO43556 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.45■□□□□ 0.54
SGCEO43556 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.45■□□□□ 0.54
SGCEO43556 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.45■□□□□ 0.54
SGCEO43556 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SGCEO43556 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGCEO43556 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.45■□□□□ 0.54
SGCEO43556 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SGCEO43556 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGCEO43556 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGCEO43556 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SGCEO43556 ZNRF2P3-201ENST00000424200 374 ntBASIC18.44■□□□□ 0.54
SGCEO43556 AC079140.4-201ENST00000507448 529 ntBASIC18.44■□□□□ 0.54
SGCEO43556 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.44■□□□□ 0.54
SGCEO43556 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.44■□□□□ 0.54
SGCEO43556 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SGCEO43556 FEM1AP4-201ENST00000443167 1987 ntBASIC18.44■□□□□ 0.54
SGCEO43556 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGCEO43556 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGCEO43556 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SGCEO43556 LINC02228-203ENST00000641970 1355 ntBASIC18.43■□□□□ 0.54
SGCEO43556 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SGCEO43556 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.43■□□□□ 0.54
SGCEO43556 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.43■□□□□ 0.54
SGCEO43556 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.43■□□□□ 0.54
SGCEO43556 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SGCEO43556 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SGCEO43556 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SGCEO43556 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SGCEO43556 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SGCEO43556 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SGCEO43556 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.42■□□□□ 0.54
SGCEO43556 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.42■□□□□ 0.54
SGCEO43556 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.42■□□□□ 0.54
SGCEO43556 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.42■□□□□ 0.54
SGCEO43556 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms