Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
XRCC2O43543 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.19■□□□□ 0.5
XRCC2O43543 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
XRCC2O43543 AC053503.5-201ENST00000601508 636 ntBASIC18.19■□□□□ 0.5
XRCC2O43543 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
XRCC2O43543 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.19■□□□□ 0.5
XRCC2O43543 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
XRCC2O43543 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC2O43543 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 AC005229.4-201ENST00000610085 2198 ntBASIC18.18■□□□□ 0.5
XRCC2O43543 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.18■□□□□ 0.5
XRCC2O43543 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.18■□□□□ 0.5
XRCC2O43543 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
XRCC2O43543 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
XRCC2O43543 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC2O43543 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
XRCC2O43543 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
XRCC2O43543 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.17■□□□□ 0.5
XRCC2O43543 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 AC079140.4-201ENST00000507448 529 ntBASIC18.17■□□□□ 0.5
XRCC2O43543 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.17■□□□□ 0.5
XRCC2O43543 EEF1DP3-203ENST00000566025 782 ntBASIC18.17■□□□□ 0.5
XRCC2O43543 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC2O43543 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 AL049796.1-201ENST00000565336 1766 ntBASIC18.17■□□□□ 0.5
XRCC2O43543 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC2O43543 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC2O43543 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.17■□□□□ 0.5
XRCC2O43543 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
XRCC2O43543 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
XRCC2O43543 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.16■□□□□ 0.5
XRCC2O43543 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.16■□□□□ 0.5
XRCC2O43543 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.16■□□□□ 0.5
XRCC2O43543 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC2O43543 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.15■□□□□ 0.5
XRCC2O43543 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 AF106564.1-201ENST00000607058 2553 ntBASIC18.15■□□□□ 0.5
XRCC2O43543 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.15■□□□□ 0.5
XRCC2O43543 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.15■□□□□ 0.5
XRCC2O43543 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.15■□□□□ 0.5
XRCC2O43543 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC2O43543 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.15■□□□□ 0.5
XRCC2O43543 LINC02228-203ENST00000641970 1355 ntBASIC18.15■□□□□ 0.5
XRCC2O43543 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
XRCC2O43543 KRT87P-202ENST00000534226 1464 ntBASIC18.14■□□□□ 0.5
XRCC2O43543 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.14■□□□□ 0.5
XRCC2O43543 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
XRCC2O43543 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.14■□□□□ 0.49
XRCC2O43543 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.14■□□□□ 0.49
XRCC2O43543 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.14■□□□□ 0.49
XRCC2O43543 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
XRCC2O43543 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC2O43543 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.14■□□□□ 0.49
XRCC2O43543 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms