Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.78■□□□□ 0.76
RRP8O43159 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.77■□□□□ 0.76
RRP8O43159 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.77■□□□□ 0.76
RRP8O43159 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RRP8O43159 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RRP8O43159 BX088651.1-201ENST00000540551 451 ntBASIC19.77■□□□□ 0.76
RRP8O43159 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RRP8O43159 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RRP8O43159 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RRP8O43159 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RRP8O43159 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
RRP8O43159 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RRP8O43159 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.77■□□□□ 0.75
RRP8O43159 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
RRP8O43159 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.76■□□□□ 0.75
RRP8O43159 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.76■□□□□ 0.75
RRP8O43159 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.76■□□□□ 0.75
RRP8O43159 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.76■□□□□ 0.75
RRP8O43159 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
RRP8O43159 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RRP8O43159 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
RRP8O43159 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RRP8O43159 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RRP8O43159 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RRP8O43159 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RRP8O43159 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.75■□□□□ 0.75
RRP8O43159 LINC01960-201ENST00000563759 1884 ntBASIC19.75■□□□□ 0.75
RRP8O43159 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RRP8O43159 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RRP8O43159 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RRP8O43159 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RRP8O43159 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.75■□□□□ 0.75
RRP8O43159 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RRP8O43159 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RRP8O43159 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
RRP8O43159 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.74■□□□□ 0.75
RRP8O43159 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
RRP8O43159 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RRP8O43159 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.74■□□□□ 0.75
RRP8O43159 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RRP8O43159 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.74■□□□□ 0.75
RRP8O43159 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
RRP8O43159 PNMA6B-201ENST00000538162 1200 ntBASIC19.74■□□□□ 0.75
RRP8O43159 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.74■□□□□ 0.75
RRP8O43159 AC092368.3-202ENST00000574180 1591 ntBASIC19.74■□□□□ 0.75
RRP8O43159 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.74■□□□□ 0.75
RRP8O43159 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RRP8O43159 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
RRP8O43159 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 KRT17P1-201ENST00000399211 1546 ntBASIC19.73■□□□□ 0.75
RRP8O43159 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RRP8O43159 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RRP8O43159 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.73■□□□□ 0.75
RRP8O43159 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.73■□□□□ 0.75
RRP8O43159 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.73■□□□□ 0.75
RRP8O43159 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RRP8O43159 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.73■□□□□ 0.75
RRP8O43159 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
RRP8O43159 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RRP8O43159 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RRP8O43159 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RRP8O43159 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RRP8O43159 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms