Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.34■□□□□ 0.69
TO15178 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TO15178 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 SLC7A5P2-201ENST00000553010 536 ntBASIC19.34■□□□□ 0.69
TO15178 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.34■□□□□ 0.69
TO15178 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.34■□□□□ 0.69
TO15178 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.34■□□□□ 0.69
TO15178 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.34■□□□□ 0.69
TO15178 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TO15178 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
TO15178 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TO15178 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.34■□□□□ 0.69
TO15178 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TO15178 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
TO15178 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TO15178 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TO15178 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.33■□□□□ 0.68
TO15178 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.33■□□□□ 0.68
TO15178 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.33■□□□□ 0.68
TO15178 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TO15178 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TO15178 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TO15178 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TO15178 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TO15178 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.33■□□□□ 0.68
TO15178 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.33■□□□□ 0.68
TO15178 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.32■□□□□ 0.68
TO15178 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.32■□□□□ 0.68
TO15178 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.32■□□□□ 0.68
TO15178 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TO15178 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 UBE2DNL-204ENST00000602536 740 ntBASIC19.32■□□□□ 0.68
TO15178 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.32■□□□□ 0.68
TO15178 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
TO15178 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.32■□□□□ 0.68
TO15178 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.32■□□□□ 0.68
TO15178 AL024507.2-201ENST00000606070 2574 ntBASIC19.32■□□□□ 0.68
TO15178 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.32■□□□□ 0.68
TO15178 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TO15178 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TO15178 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.31■□□□□ 0.68
TO15178 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.31■□□□□ 0.68
TO15178 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.31■□□□□ 0.68
TO15178 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.31■□□□□ 0.68
TO15178 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.31■□□□□ 0.68
TO15178 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TO15178 MYCNOS-205ENST00000641950 531 ntBASIC19.31■□□□□ 0.68
TO15178 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TO15178 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TO15178 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.31■□□□□ 0.68
TO15178 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TO15178 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.3■□□□□ 0.68
TO15178 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
TO15178 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.3■□□□□ 0.68
TO15178 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TO15178 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.3■□□□□ 0.68
TO15178 AC016769.1-201ENST00000409132 1010 ntBASIC19.3■□□□□ 0.68
TO15178 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.3■□□□□ 0.68
TO15178 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.3■□□□□ 0.68
TO15178 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TO15178 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.3■□□□□ 0.68
TO15178 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.3■□□□□ 0.68
TO15178 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.3■□□□□ 0.68
TO15178 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.3■□□□□ 0.68
TO15178 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TO15178 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TO15178 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TO15178 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.29■□□□□ 0.68
TO15178 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.29■□□□□ 0.68
TO15178 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TO15178 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TO15178 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TO15178 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms