Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CHD1O14646 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CHD1O14646 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CHD1O14646 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC34.58■■■■□ 3.13
CHD1O14646 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CHD1O14646 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
CHD1O14646 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
CHD1O14646 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CHD1O14646 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC34.57■■■■□ 3.12
CHD1O14646 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC34.57■■■■□ 3.12
CHD1O14646 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC34.57■■■■□ 3.12
CHD1O14646 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC34.57■■■■□ 3.12
CHD1O14646 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
CHD1O14646 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CHD1O14646 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CHD1O14646 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CHD1O14646 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC34.56■■■■□ 3.12
CHD1O14646 AL139125.2-201ENST00000623134 1869 ntBASIC34.56■■■■□ 3.12
CHD1O14646 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC34.56■■■■□ 3.12
CHD1O14646 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC34.56■■■■□ 3.12
CHD1O14646 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
CHD1O14646 AC092865.7-201ENST00000641832 219 ntBASIC34.56■■■■□ 3.12
CHD1O14646 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC34.55■■■■□ 3.12
CHD1O14646 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC34.55■■■■□ 3.12
CHD1O14646 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 MCRIP2P1-201ENST00000394346 511 ntBASIC34.55■■■■□ 3.12
CHD1O14646 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC34.55■■■■□ 3.12
CHD1O14646 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC34.55■■■■□ 3.12
CHD1O14646 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CHD1O14646 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC34.54■■■■□ 3.12
CHD1O14646 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CHD1O14646 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CHD1O14646 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CHD1O14646 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CHD1O14646 ARMC10P1-201ENST00000313754 855 ntBASIC34.54■■■■□ 3.12
CHD1O14646 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
CHD1O14646 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CHD1O14646 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC34.54■■■■□ 3.12
CHD1O14646 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
CHD1O14646 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CHD1O14646 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC34.53■■■■□ 3.12
CHD1O14646 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CHD1O14646 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD1O14646 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
CHD1O14646 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD1O14646 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC34.52■■■■□ 3.12
CHD1O14646 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC34.52■■■■□ 3.12
CHD1O14646 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CHD1O14646 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CHD1O14646 MIR6786-201ENST00000616843 113 ntBASIC34.52■■■■□ 3.12
CHD1O14646 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CHD1O14646 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC34.52■■■■□ 3.12
CHD1O14646 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
CHD1O14646 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CHD1O14646 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
CHD1O14646 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC34.52■■■■□ 3.12
CHD1O14646 AL135905.2-201ENST00000584934 1404 ntBASIC34.51■■■■□ 3.12
CHD1O14646 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC34.51■■■■□ 3.12
CHD1O14646 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CHD1O14646 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC34.51■■■■□ 3.12
CHD1O14646 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CHD1O14646 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CHD1O14646 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CHD1O14646 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC34.51■■■■□ 3.12
CHD1O14646 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CHD1O14646 AP001412.1-201ENST00000608405 714 ntBASIC34.51■■■■□ 3.12
CHD1O14646 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC34.5■■■■□ 3.11
CHD1O14646 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CHD1O14646 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC34.5■■■■□ 3.11
CHD1O14646 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
CHD1O14646 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC34.5■■■■□ 3.11
CHD1O14646 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CHD1O14646 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
CHD1O14646 MFF-205ENST00000354503 1085 ntTSL 2 BASIC34.5■■■■□ 3.11
CHD1O14646 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CHD1O14646 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC34.5■■■■□ 3.11
CHD1O14646 GRAP-204ENST00000573099 846 ntTSL 3 BASIC34.5■■■■□ 3.11
CHD1O14646 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CHD1O14646 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1O14646 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1O14646 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC34.49■■■■□ 3.11
CHD1O14646 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1O14646 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1O14646 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
CHD1O14646 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1O14646 BRWD1-AS2-201ENST00000603064 1028 ntBASIC34.49■■■■□ 3.11
CHD1O14646 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1O14646 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
CHD1O14646 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC34.48■■■■□ 3.11
CHD1O14646 CRK-204ENST00000574295 1391 ntTSL 5 BASIC34.48■■■■□ 3.11
CHD1O14646 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms