Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 AC121338.2-201ENST00000622535 1744 ntBASIC20.26■□□□□ 0.83
SDHDO14521 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SDHDO14521 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHDO14521 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SDHDO14521 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHDO14521 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHDO14521 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.25■□□□□ 0.83
SDHDO14521 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHDO14521 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.25■□□□□ 0.83
SDHDO14521 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SDHDO14521 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SDHDO14521 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHDO14521 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.24■□□□□ 0.83
SDHDO14521 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.24■□□□□ 0.83
SDHDO14521 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SDHDO14521 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.24■□□□□ 0.83
SDHDO14521 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SDHDO14521 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.24■□□□□ 0.83
SDHDO14521 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SDHDO14521 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SDHDO14521 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SDHDO14521 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDHDO14521 AL391422.3-201ENST00000603791 2761 ntBASIC20.23■□□□□ 0.83
SDHDO14521 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHDO14521 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHDO14521 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHDO14521 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHDO14521 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.23■□□□□ 0.83
SDHDO14521 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDHDO14521 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.23■□□□□ 0.83
SDHDO14521 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHDO14521 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.23■□□□□ 0.83
SDHDO14521 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.23■□□□□ 0.83
SDHDO14521 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.23■□□□□ 0.83
SDHDO14521 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SDHDO14521 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHDO14521 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.23■□□□□ 0.83
SDHDO14521 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHDO14521 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHDO14521 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SDHDO14521 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SDHDO14521 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.22■□□□□ 0.83
SDHDO14521 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.22■□□□□ 0.83
SDHDO14521 AC133561.4-201ENST00000566112 224 ntBASIC20.22■□□□□ 0.83
SDHDO14521 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SDHDO14521 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.22■□□□□ 0.83
SDHDO14521 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SDHDO14521 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.22■□□□□ 0.83
SDHDO14521 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHDO14521 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHDO14521 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SDHDO14521 AC007225.1-201ENST00000566331 1836 ntBASIC20.22■□□□□ 0.83
SDHDO14521 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SDHDO14521 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.22■□□□□ 0.83
SDHDO14521 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHDO14521 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SDHDO14521 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SDHDO14521 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SDHDO14521 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHDO14521 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.21■□□□□ 0.83
SDHDO14521 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SDHDO14521 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHDO14521 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.83
SDHDO14521 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHDO14521 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SDHDO14521 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHDO14521 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SDHDO14521 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHDO14521 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms