Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 TERF1P2-201ENST00000583350 1212 ntBASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM6-TRIM34B2RNG4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.61■■□□□ 1.69
TRIM6-TRIM34B2RNG4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 KRT18P14-201ENST00000534205 1250 ntBASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM6-TRIM34B2RNG4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.59■■□□□ 1.69
TRIM6-TRIM34B2RNG4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM6-TRIM34B2RNG4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM6-TRIM34B2RNG4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.59■■□□□ 1.69
TRIM6-TRIM34B2RNG4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM6-TRIM34B2RNG4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
TRIM6-TRIM34B2RNG4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
TRIM6-TRIM34B2RNG4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 AC061975.6-201ENST00000579045 1553 ntBASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 AL049796.1-201ENST00000565336 1766 ntBASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
TRIM6-TRIM34B2RNG4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM6-TRIM34B2RNG4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms