Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 HES6-205ENST00000409356 528 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 RP9P-202ENST00000450133 1212 ntBASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV22A0A0B4J277 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV22A0A0B4J277 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV22A0A0B4J277 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC11.9□□□□□ -0.51
TRAV22A0A0B4J277 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV22A0A0B4J277 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV22A0A0B4J277 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV22A0A0B4J277 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 NRG1-221ENST00000614767 762 ntTSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRAV22A0A0B4J277 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 AC020916.1-201ENST00000587762 1774 ntBASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 AP005212.1-201ENST00000581547 1997 ntBASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 MOB2-207ENST00000614710 705 ntTSL 5 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms