Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 MIR4466-201ENST00000606121 54 ntBASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 SERBP1P1-201ENST00000396021 1160 ntBASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV8-4A0A0B4J246 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 AP005435.1-201ENST00000529293 1178 ntBASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-4A0A0B4J246 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 OR7E47P-201ENST00000546390 1422 ntBASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 AL136116.3-201ENST00000402907 1138 ntBASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-4A0A0B4J246 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-4A0A0B4J246 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV8-4A0A0B4J246 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-4A0A0B4J246 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-4A0A0B4J246 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-4A0A0B4J246 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV8-4A0A0B4J246 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms