Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 AL024507.2-201ENST00000606070 2574 ntBASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 KRT18P14-201ENST00000534205 1250 ntBASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV7-1A0A0A6YYK4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.27■□□□□ 0.2
TRBV7-1A0A0A6YYK4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 AL049796.1-201ENST00000565336 1766 ntBASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV7-1A0A0A6YYK4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L2-201ENST00000561772 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L6-201ENST00000626483 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L1-201ENST00000627662 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L8-201ENST00000629013 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L3-201ENST00000630187 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L7-201ENST00000630678 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DUX4L5-201ENST00000630834 1275 ntBASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV7-1A0A0A6YYK4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV7-1A0A0A6YYK4 AC010141.2-201ENST00000452426 721 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms