Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.4■■■□□ 2.14
MTCL1Q9Y4B5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.4■■■□□ 2.14
MTCL1Q9Y4B5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
MTCL1Q9Y4B5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
MTCL1Q9Y4B5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MTCL1Q9Y4B5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.37■■■□□ 2.13
MTCL1Q9Y4B5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MTCL1Q9Y4B5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.37■■■□□ 2.13
MTCL1Q9Y4B5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
MTCL1Q9Y4B5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.36■■■□□ 2.13
MTCL1Q9Y4B5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
MTCL1Q9Y4B5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
MTCL1Q9Y4B5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
MTCL1Q9Y4B5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.34■■■□□ 2.13
MTCL1Q9Y4B5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
MTCL1Q9Y4B5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.33■■■□□ 2.13
MTCL1Q9Y4B5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
MTCL1Q9Y4B5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
MTCL1Q9Y4B5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.31■■■□□ 2.12
MTCL1Q9Y4B5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MTCL1Q9Y4B5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
MTCL1Q9Y4B5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.29■■■□□ 2.12
MTCL1Q9Y4B5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
MTCL1Q9Y4B5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
MTCL1Q9Y4B5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.28■■■□□ 2.12
MTCL1Q9Y4B5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
MTCL1Q9Y4B5 AC021231.2-201ENST00000594613 730 ntBASIC28.27■■■□□ 2.12
MTCL1Q9Y4B5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.27■■■□□ 2.12
MTCL1Q9Y4B5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
MTCL1Q9Y4B5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.26■■■□□ 2.11
MTCL1Q9Y4B5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
MTCL1Q9Y4B5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
MTCL1Q9Y4B5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.25■■■□□ 2.11
MTCL1Q9Y4B5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.24■■■□□ 2.11
MTCL1Q9Y4B5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.24■■■□□ 2.11
MTCL1Q9Y4B5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.24■■■□□ 2.11
MTCL1Q9Y4B5 MIR6090-201ENST00000622481 60 ntBASIC28.24■■■□□ 2.11
MTCL1Q9Y4B5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
MTCL1Q9Y4B5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
MTCL1Q9Y4B5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.23■■■□□ 2.11
MTCL1Q9Y4B5 MIR4449-201ENST00000578365 66 ntBASIC28.23■■■□□ 2.11
MTCL1Q9Y4B5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
MTCL1Q9Y4B5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
MTCL1Q9Y4B5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.22■■■□□ 2.11
MTCL1Q9Y4B5 MIR3648-2-201ENST00000581792 180 ntBASIC28.22■■■□□ 2.11
MTCL1Q9Y4B5 MIR3648-1-201ENST00000615959 180 ntBASIC28.22■■■□□ 2.11
MTCL1Q9Y4B5 AC016575.1-201ENST00000607026 382 ntBASIC28.2■■■□□ 2.11
MTCL1Q9Y4B5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
MTCL1Q9Y4B5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.2■■■□□ 2.1
MTCL1Q9Y4B5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
MTCL1Q9Y4B5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MTCL1Q9Y4B5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
MTCL1Q9Y4B5 CR559946.2-201ENST00000623684 991 ntBASIC28.17■■■□□ 2.1
MTCL1Q9Y4B5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MTCL1Q9Y4B5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MTCL1Q9Y4B5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
MTCL1Q9Y4B5 AC120057.4-201ENST00000624722 1615 ntBASIC28.16■■■□□ 2.1
MTCL1Q9Y4B5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
MTCL1Q9Y4B5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.15■■■□□ 2.1
MTCL1Q9Y4B5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
MTCL1Q9Y4B5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
MTCL1Q9Y4B5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.14■■■□□ 2.1
MTCL1Q9Y4B5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
MTCL1Q9Y4B5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.13■■■□□ 2.09
MTCL1Q9Y4B5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.13■■■□□ 2.09
MTCL1Q9Y4B5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
MTCL1Q9Y4B5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
MTCL1Q9Y4B5 MIR639-201ENST00000384974 98 ntBASIC28.11■■■□□ 2.09
MTCL1Q9Y4B5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
MTCL1Q9Y4B5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.1■■■□□ 2.09
MTCL1Q9Y4B5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
MTCL1Q9Y4B5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.09■■■□□ 2.09
MTCL1Q9Y4B5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.08■■■□□ 2.09
MTCL1Q9Y4B5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
MTCL1Q9Y4B5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
MTCL1Q9Y4B5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.06■■■□□ 2.08
MTCL1Q9Y4B5 LINC01971-201ENST00000617888 1048 ntBASIC28.06■■■□□ 2.08
MTCL1Q9Y4B5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 DUX4L11-201ENST00000611504 1267 ntBASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 DUX4L12-201ENST00000614593 1267 ntBASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 DUX4L14-201ENST00000621227 1267 ntBASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.04■■■□□ 2.08
MTCL1Q9Y4B5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
MTCL1Q9Y4B5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
MTCL1Q9Y4B5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
MTCL1Q9Y4B5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
MTCL1Q9Y4B5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
MTCL1Q9Y4B5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
MTCL1Q9Y4B5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
MTCL1Q9Y4B5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
MTCL1Q9Y4B5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
MTCL1Q9Y4B5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28■■■□□ 2.07
MTCL1Q9Y4B5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
MTCL1Q9Y4B5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.99■■■□□ 2.07
MTCL1Q9Y4B5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.99■■■□□ 2.07
MTCL1Q9Y4B5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.98■■■□□ 2.07
MTCL1Q9Y4B5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
MTCL1Q9Y4B5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms