Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.57■■■□□ 2.48
DDX41Q9UJV9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
DDX41Q9UJV9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
DDX41Q9UJV9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.56■■■□□ 2.48
DDX41Q9UJV9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
DDX41Q9UJV9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
DDX41Q9UJV9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
DDX41Q9UJV9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
DDX41Q9UJV9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
DDX41Q9UJV9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
DDX41Q9UJV9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
DDX41Q9UJV9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
DDX41Q9UJV9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
DDX41Q9UJV9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
DDX41Q9UJV9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
DDX41Q9UJV9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.51■■■□□ 2.47
DDX41Q9UJV9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX41Q9UJV9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
DDX41Q9UJV9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX41Q9UJV9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.48■■■□□ 2.47
DDX41Q9UJV9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
DDX41Q9UJV9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.47■■■□□ 2.47
DDX41Q9UJV9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX41Q9UJV9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX41Q9UJV9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
DDX41Q9UJV9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX41Q9UJV9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
DDX41Q9UJV9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
DDX41Q9UJV9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
DDX41Q9UJV9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.45■■■□□ 2.47
DDX41Q9UJV9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
DDX41Q9UJV9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX41Q9UJV9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX41Q9UJV9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.43■■■□□ 2.46
DDX41Q9UJV9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
DDX41Q9UJV9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
DDX41Q9UJV9 MIR7108-201ENST00000614319 87 ntBASIC30.42■■■□□ 2.46
DDX41Q9UJV9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
DDX41Q9UJV9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
DDX41Q9UJV9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
DDX41Q9UJV9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
DDX41Q9UJV9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.4■■■□□ 2.46
DDX41Q9UJV9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.4■■■□□ 2.46
DDX41Q9UJV9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
DDX41Q9UJV9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
DDX41Q9UJV9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
DDX41Q9UJV9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
DDX41Q9UJV9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
DDX41Q9UJV9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
DDX41Q9UJV9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
DDX41Q9UJV9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.38■■■□□ 2.45
DDX41Q9UJV9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.37■■■□□ 2.45
DDX41Q9UJV9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
DDX41Q9UJV9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX41Q9UJV9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.35■■■□□ 2.45
DDX41Q9UJV9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.34■■■□□ 2.45
DDX41Q9UJV9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.34■■■□□ 2.45
DDX41Q9UJV9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.34■■■□□ 2.45
DDX41Q9UJV9 AC120057.4-201ENST00000624722 1615 ntBASIC30.33■■■□□ 2.45
DDX41Q9UJV9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
DDX41Q9UJV9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.33■■■□□ 2.45
DDX41Q9UJV9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.33■■■□□ 2.45
DDX41Q9UJV9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
DDX41Q9UJV9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.3■■■□□ 2.44
DDX41Q9UJV9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
DDX41Q9UJV9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.29■■■□□ 2.44
DDX41Q9UJV9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.28■■■□□ 2.44
DDX41Q9UJV9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
DDX41Q9UJV9 ZNRF2P2-203ENST00000454624 420 ntBASIC30.27■■■□□ 2.44
DDX41Q9UJV9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.27■■■□□ 2.44
DDX41Q9UJV9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.26■■■□□ 2.43
DDX41Q9UJV9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DDX41Q9UJV9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
DDX41Q9UJV9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
DDX41Q9UJV9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.24■■■□□ 2.43
DDX41Q9UJV9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
DDX41Q9UJV9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.23■■■□□ 2.43
DDX41Q9UJV9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.23■■■□□ 2.43
DDX41Q9UJV9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
DDX41Q9UJV9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.22■■■□□ 2.43
DDX41Q9UJV9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
DDX41Q9UJV9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
DDX41Q9UJV9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
DDX41Q9UJV9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
DDX41Q9UJV9 DUX4L29-201ENST00000425409 679 ntBASIC30.2■■■□□ 2.43
DDX41Q9UJV9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
DDX41Q9UJV9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.19■■■□□ 2.42
DDX41Q9UJV9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
DDX41Q9UJV9 MIR6090-201ENST00000622481 60 ntBASIC30.19■■■□□ 2.42
DDX41Q9UJV9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
DDX41Q9UJV9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX41Q9UJV9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.18■■■□□ 2.42
DDX41Q9UJV9 AC108673.1-201ENST00000510422 1159 ntBASIC30.18■■■□□ 2.42
DDX41Q9UJV9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
DDX41Q9UJV9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX41Q9UJV9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX41Q9UJV9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.17■■■□□ 2.42
DDX41Q9UJV9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX41Q9UJV9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.15■■■□□ 2.42
DDX41Q9UJV9 AC021231.2-201ENST00000594613 730 ntBASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms