Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KRTAP3-1Q9BYR8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRTAP3-1Q9BYR8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRTAP3-1Q9BYR8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRTAP3-1Q9BYR8 AL135925.1-201ENST00000605920 1701 ntBASIC13.61□□□□□ -0.23
KRTAP3-1Q9BYR8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRTAP3-1Q9BYR8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRTAP3-1Q9BYR8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC13.6□□□□□ -0.23
KRTAP3-1Q9BYR8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
KRTAP3-1Q9BYR8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP3-1Q9BYR8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
KRTAP3-1Q9BYR8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRTAP3-1Q9BYR8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
KRTAP3-1Q9BYR8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRTAP3-1Q9BYR8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP3-1Q9BYR8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KRTAP3-1Q9BYR8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP3-1Q9BYR8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP3-1Q9BYR8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP3-1Q9BYR8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-1Q9BYR8 DYNLL1-208ENST00000550178 581 ntBASIC13.56□□□□□ -0.24
KRTAP3-1Q9BYR8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC13.56□□□□□ -0.24
KRTAP3-1Q9BYR8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-1Q9BYR8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-1Q9BYR8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-1Q9BYR8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-1Q9BYR8 ZNRF2P1-201ENST00000441407 443 ntBASIC13.55□□□□□ -0.24
KRTAP3-1Q9BYR8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-1Q9BYR8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-1Q9BYR8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-1Q9BYR8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-1Q9BYR8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KRTAP3-1Q9BYR8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-1Q9BYR8 AC142086.6-201ENST00000621154 1765 ntBASIC13.53□□□□□ -0.24
KRTAP3-1Q9BYR8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP3-1Q9BYR8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-1Q9BYR8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC13.53□□□□□ -0.24
KRTAP3-1Q9BYR8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC13.52□□□□□ -0.25
KRTAP3-1Q9BYR8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRTAP3-1Q9BYR8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC13.52□□□□□ -0.25
KRTAP3-1Q9BYR8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC13.52□□□□□ -0.25
KRTAP3-1Q9BYR8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
KRTAP3-1Q9BYR8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRTAP3-1Q9BYR8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC13.51□□□□□ -0.25
KRTAP3-1Q9BYR8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KRTAP3-1Q9BYR8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KRTAP3-1Q9BYR8 AL031258.1-201ENST00000623562 325 ntBASIC13.5□□□□□ -0.25
KRTAP3-1Q9BYR8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KRTAP3-1Q9BYR8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KRTAP3-1Q9BYR8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KRTAP3-1Q9BYR8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KRTAP3-1Q9BYR8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP3-1Q9BYR8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP3-1Q9BYR8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP3-1Q9BYR8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP3-1Q9BYR8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP3-1Q9BYR8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP3-1Q9BYR8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP3-1Q9BYR8 AL139393.2-201ENST00000608721 2025 ntBASIC13.46□□□□□ -0.25
KRTAP3-1Q9BYR8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KRTAP3-1Q9BYR8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KRTAP3-1Q9BYR8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
KRTAP3-1Q9BYR8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
KRTAP3-1Q9BYR8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KRTAP3-1Q9BYR8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-1Q9BYR8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-1Q9BYR8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KRTAP3-1Q9BYR8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-1Q9BYR8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
KRTAP3-1Q9BYR8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
KRTAP3-1Q9BYR8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRTAP3-1Q9BYR8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
KRTAP3-1Q9BYR8 DRD5P2-201ENST00000421395 2012 ntBASIC13.42□□□□□ -0.26
KRTAP3-1Q9BYR8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-1Q9BYR8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRTAP3-1Q9BYR8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC13.4□□□□□ -0.26
KRTAP3-1Q9BYR8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC13.4□□□□□ -0.26
KRTAP3-1Q9BYR8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KRTAP3-1Q9BYR8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-1Q9BYR8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
KRTAP3-1Q9BYR8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-1Q9BYR8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP3-1Q9BYR8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
KRTAP3-1Q9BYR8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC13.39□□□□□ -0.27
KRTAP3-1Q9BYR8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC13.38□□□□□ -0.27
KRTAP3-1Q9BYR8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRTAP3-1Q9BYR8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC13.38□□□□□ -0.27
KRTAP3-1Q9BYR8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRTAP3-1Q9BYR8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-1Q9BYR8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-1Q9BYR8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-1Q9BYR8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KRTAP3-1Q9BYR8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC13.37□□□□□ -0.27
KRTAP3-1Q9BYR8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms