Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.53■■■□□ 2.64
PTPN18Q99952 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
PTPN18Q99952 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTPN18Q99952 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.51■■■□□ 2.63
PTPN18Q99952 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.51■■■□□ 2.63
PTPN18Q99952 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.51■■■□□ 2.63
PTPN18Q99952 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.5■■■□□ 2.63
PTPN18Q99952 LINC01971-201ENST00000617888 1048 ntBASIC31.49■■■□□ 2.63
PTPN18Q99952 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.48■■■□□ 2.63
PTPN18Q99952 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.48■■■□□ 2.63
PTPN18Q99952 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.47■■■□□ 2.63
PTPN18Q99952 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PTPN18Q99952 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PTPN18Q99952 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
PTPN18Q99952 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.44■■■□□ 2.62
PTPN18Q99952 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PTPN18Q99952 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPN18Q99952 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPN18Q99952 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPN18Q99952 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
PTPN18Q99952 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN18Q99952 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN18Q99952 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN18Q99952 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN18Q99952 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PTPN18Q99952 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPN18Q99952 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.37■■■□□ 2.61
PTPN18Q99952 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PTPN18Q99952 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
PTPN18Q99952 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPN18Q99952 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.36■■■□□ 2.61
PTPN18Q99952 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PTPN18Q99952 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN18Q99952 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PTPN18Q99952 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PTPN18Q99952 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PTPN18Q99952 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPN18Q99952 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.32■■■□□ 2.6
PTPN18Q99952 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPN18Q99952 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PTPN18Q99952 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PTPN18Q99952 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
PTPN18Q99952 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PTPN18Q99952 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PTPN18Q99952 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.29■■■□□ 2.6
PTPN18Q99952 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PTPN18Q99952 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PTPN18Q99952 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.27■■■□□ 2.6
PTPN18Q99952 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.27■■■□□ 2.6
PTPN18Q99952 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.27■■■□□ 2.6
PTPN18Q99952 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
PTPN18Q99952 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.26■■■□□ 2.59
PTPN18Q99952 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PTPN18Q99952 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.24■■■□□ 2.59
PTPN18Q99952 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.23■■■□□ 2.59
PTPN18Q99952 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.23■■■□□ 2.59
PTPN18Q99952 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PTPN18Q99952 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PTPN18Q99952 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN18Q99952 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN18Q99952 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN18Q99952 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN18Q99952 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PTPN18Q99952 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.2■■■□□ 2.59
PTPN18Q99952 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PTPN18Q99952 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.19■■■□□ 2.58
PTPN18Q99952 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
PTPN18Q99952 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN18Q99952 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN18Q99952 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PTPN18Q99952 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.17■■■□□ 2.58
PTPN18Q99952 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.16■■■□□ 2.58
PTPN18Q99952 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.16■■■□□ 2.58
PTPN18Q99952 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.15■■■□□ 2.58
PTPN18Q99952 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L13-201ENST00000554103 1267 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L15-201ENST00000611059 1267 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L23-201ENST00000615195 1269 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L24-201ENST00000617576 1269 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L22-201ENST00000618238 1269 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L20-201ENST00000619712 1269 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L21-201ENST00000622058 1269 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L10-201ENST00000622460 1267 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 DUX4L25-201ENST00000624915 1269 ntBASIC31.15■■■□□ 2.58
PTPN18Q99952 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.15■■■□□ 2.58
PTPN18Q99952 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PTPN18Q99952 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PTPN18Q99952 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTPN18Q99952 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.13■■■□□ 2.57
PTPN18Q99952 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTPN18Q99952 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTPN18Q99952 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTPN18Q99952 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.11■■■□□ 2.57
PTPN18Q99952 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.11■■■□□ 2.57
PTPN18Q99952 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PTPN18Q99952 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
PTPN18Q99952 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.08■■■□□ 2.57
PTPN18Q99952 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
PTPN18Q99952 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.05■■■□□ 2.56
PTPN18Q99952 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms