Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 RIB1YBL033C 1038 nt14.49□□□□□ -0.09
TY1B-DR3Q99231 NUC1YJL208C 990 nt14.45□□□□□ -0.1
TY1B-DR3Q99231 BNI5YNL166C 1347 nt14.43□□□□□ -0.1
TY1B-DR3Q99231 CDD1YLR245C 429 nt14.43□□□□□ -0.1
TY1B-DR3Q99231 YMR103CYMR103C 363 nt14.43□□□□□ -0.1
TY1B-DR3Q99231 SOD2YHR008C 702 nt14.42□□□□□ -0.1
TY1B-DR3Q99231 TUB4YLR212C 1422 nt14.42□□□□□ -0.1
TY1B-DR3Q99231 IRC24YIR036C 792 nt14.42□□□□□ -0.1
TY1B-DR3Q99231 SSN3YPL042C 1668 nt14.41□□□□□ -0.1
TY1B-DR3Q99231 YER152W-AYER152W-A 567 nt14.41□□□□□ -0.1
TY1B-DR3Q99231 SAM35YHR083W 990 nt14.4□□□□□ -0.1
TY1B-DR3Q99231 PAR32YDL173W 888 nt14.39□□□□□ -0.11
TY1B-DR3Q99231 GSF2YML048W 1212 nt14.39□□□□□ -0.11
TY1B-DR3Q99231 GND2YGR256W 1479 nt14.37□□□□□ -0.11
TY1B-DR3Q99231 YPR126CYPR126C 309 nt14.37□□□□□ -0.11
TY1B-DR3Q99231 TOA2YKL058W 369 nt14.36□□□□□ -0.11
TY1B-DR3Q99231 MHF1YOL086W-A 273 nt14.36□□□□□ -0.11
TY1B-DR3Q99231 QDR2YIL121W 1629 nt14.34□□□□□ -0.11
TY1B-DR3Q99231 YIA6YIL006W 1122 nt14.33□□□□□ -0.12
TY1B-DR3Q99231 DBP1YPL119C 1854 nt14.3□□□□□ -0.12
TY1B-DR3Q99231 CTI6YPL181W 1521 nt14.29□□□□□ -0.12
TY1B-DR3Q99231 PHO23YNL097C 993 nt14.29□□□□□ -0.12
TY1B-DR3Q99231 HXT1YHR094C 1713 nt14.28□□□□□ -0.12
TY1B-DR3Q99231 RIB7YBR153W 735 nt14.28□□□□□ -0.12
TY1B-DR3Q99231 TRT2tT(CGU)K 72 nt14.27□□□□□ -0.12
TY1B-DR3Q99231 RPT5YOR117W 1305 nt14.25□□□□□ -0.13
TY1B-DR3Q99231 KRE1YNL322C 942 nt14.25□□□□□ -0.13
TY1B-DR3Q99231 BRR1YPR057W 1026 nt14.25□□□□□ -0.13
TY1B-DR3Q99231 POT1YIL160C 1254 nt14.24□□□□□ -0.13
TY1B-DR3Q99231 YCP4YCR004C 744 nt14.24□□□□□ -0.13
TY1B-DR3Q99231 YCR025CYCR025C 411 nt14.24□□□□□ -0.13
TY1B-DR3Q99231 TPS1YBR126C 1488 nt14.23□□□□□ -0.13
TY1B-DR3Q99231 DDI1YER143W 1287 nt14.21□□□□□ -0.13
TY1B-DR3Q99231 ACO2YJL200C 2370 nt14.21□□□□□ -0.14
TY1B-DR3Q99231 NAS2YIL007C 663 nt14.2□□□□□ -0.14
TY1B-DR3Q99231 OYE2YHR179W 1203 nt14.19□□□□□ -0.14
TY1B-DR3Q99231 NIF3YGL221C 867 nt14.16□□□□□ -0.14
TY1B-DR3Q99231 LEU9YOR108W 1815 nt14.16□□□□□ -0.14
TY1B-DR3Q99231 LYS20YDL182W 1287 nt14.14□□□□□ -0.15
TY1B-DR3Q99231 UFO1YML088W 2007 nt14.14□□□□□ -0.15
TY1B-DR3Q99231 DAK2YFL053W 1776 nt14.14□□□□□ -0.15
TY1B-DR3Q99231 SAM2YDR502C 1155 nt14.13□□□□□ -0.15
TY1B-DR3Q99231 MSC1YML128C 1542 nt14.12□□□□□ -0.15
TY1B-DR3Q99231 SAM50YNL026W 1455 nt14.1□□□□□ -0.15
TY1B-DR3Q99231 HIF1YLL022C 1158 nt14.1□□□□□ -0.15
TY1B-DR3Q99231 BMT6YLR063W 1098 nt14.08□□□□□ -0.16
TY1B-DR3Q99231 IGD1YFR017C 588 nt14.07□□□□□ -0.16
TY1B-DR3Q99231 BUD20YLR074C 501 nt14.06□□□□□ -0.16
TY1B-DR3Q99231 DPS1YLL018C 1674 nt14.06□□□□□ -0.16
TY1B-DR3Q99231 FUB1YCR076C 753 nt14.05□□□□□ -0.16
TY1B-DR3Q99231 OYE3YPL171C 1203 nt14.05□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)DtA(AGC)D 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)FtA(AGC)F 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)GtA(AGC)G 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)HtA(AGC)H 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)JtA(AGC)J 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)K1tA(AGC)K1 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)K2tA(AGC)K2 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)LtA(AGC)L 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)M1tA(AGC)M1 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)M2tA(AGC)M2 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 tA(AGC)PtA(AGC)P 73 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 SHY1YGR112W 1170 nt14.04□□□□□ -0.16
TY1B-DR3Q99231 FLR1YBR008C 1647 nt14.03□□□□□ -0.16
TY1B-DR3Q99231 SNF1YDR477W 1902 nt14.03□□□□□ -0.16
TY1B-DR3Q99231 RAS2YNL098C 969 nt14.01□□□□□ -0.17
TY1B-DR3Q99231 EAF3YPR023C 1206 nt14.01□□□□□ -0.17
TY1B-DR3Q99231 SEC61YLR378C 1443 nt14□□□□□ -0.17
TY1B-DR3Q99231 SWM1YDR260C 513 nt13.99□□□□□ -0.17
TY1B-DR3Q99231 SPE2YOL052C 1191 nt13.99□□□□□ -0.17
TY1B-DR3Q99231 PRP4YPR178W 1398 nt13.98□□□□□ -0.17
TY1B-DR3Q99231 FLX1YIL134W 936 nt13.98□□□□□ -0.17
TY1B-DR3Q99231 YER188WYER188W 720 nt13.97□□□□□ -0.17
TY1B-DR3Q99231 TMA23YMR269W 636 nt13.97□□□□□ -0.17
TY1B-DR3Q99231 YFR036W-AYFR036W-A 651 nt13.96□□□□□ -0.18
TY1B-DR3Q99231 IPL1YPL209C 1104 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 TGA1tA(UGC)A 73 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 tA(UGC)EtA(UGC)E 73 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 tA(UGC)GtA(UGC)G 73 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 tA(UGC)LtA(UGC)L 73 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 tA(UGC)OtA(UGC)O 73 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 ADE8YDR408C 645 nt13.94□□□□□ -0.18
TY1B-DR3Q99231 SPS100YHR139C 981 nt13.93□□□□□ -0.18
TY1B-DR3Q99231 YNL024CYNL024C 741 nt13.93□□□□□ -0.18
TY1B-DR3Q99231 LSM5YER146W 282 nt13.92□□□□□ -0.18
TY1B-DR3Q99231 IML3YBR107C 738 nt13.92□□□□□ -0.18
TY1B-DR3Q99231 PHB2YGR231C 933 nt13.9□□□□□ -0.18
TY1B-DR3Q99231 RSC8YFR037C 1674 nt13.89□□□□□ -0.19
TY1B-DR3Q99231 FCY1YPR062W 477 nt13.88□□□□□ -0.19
TY1B-DR3Q99231 ABZ2YMR289W 1125 nt13.87□□□□□ -0.19
TY1B-DR3Q99231 ADH3YMR083W 1128 nt13.86□□□□□ -0.19
TY1B-DR3Q99231 YPS3YLR121C 1527 nt13.84□□□□□ -0.19
TY1B-DR3Q99231 URA6YKL024C 615 nt13.81□□□□□ -0.2
TY1B-DR3Q99231 THP3YPR045C 1413 nt13.81□□□□□ -0.2
TY1B-DR3Q99231 DLD2YDL178W 1593 nt13.8□□□□□ -0.2
TY1B-DR3Q99231 YMR007WYMR007W 381 nt13.8□□□□□ -0.2
TY1B-DR3Q99231 HEM13YDR044W 987 nt13.79□□□□□ -0.2
TY1B-DR3Q99231 YDR455CYDR455C 309 nt13.79□□□□□ -0.2
TY1B-DR3Q99231 GRH1YDR517W 1119 nt13.79□□□□□ -0.2
TY1B-DR3Q99231 KAE1YKR038C 1161 nt13.78□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 50.3 ms