Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
RFFLQ8WZ73 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
RFFLQ8WZ73 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RFFLQ8WZ73 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RFFLQ8WZ73 AC139426.1-201ENST00000568218 2529 ntBASIC28.34■■■□□ 2.13
RFFLQ8WZ73 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RFFLQ8WZ73 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.32■■■□□ 2.12
RFFLQ8WZ73 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.31■■■□□ 2.12
RFFLQ8WZ73 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RFFLQ8WZ73 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
RFFLQ8WZ73 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
RFFLQ8WZ73 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.28■■■□□ 2.12
RFFLQ8WZ73 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFFLQ8WZ73 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.28■■■□□ 2.12
RFFLQ8WZ73 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFFLQ8WZ73 AL135925.1-201ENST00000605920 1701 ntBASIC28.28■■■□□ 2.12
RFFLQ8WZ73 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
RFFLQ8WZ73 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RFFLQ8WZ73 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RFFLQ8WZ73 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RFFLQ8WZ73 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.24■■■□□ 2.11
RFFLQ8WZ73 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.24■■■□□ 2.11
RFFLQ8WZ73 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RFFLQ8WZ73 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.23■■■□□ 2.11
RFFLQ8WZ73 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RFFLQ8WZ73 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.22■■■□□ 2.11
RFFLQ8WZ73 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
RFFLQ8WZ73 WASH5P-204ENST00000632292 975 ntBASIC28.21■■■□□ 2.11
RFFLQ8WZ73 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RFFLQ8WZ73 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFFLQ8WZ73 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.19■■■□□ 2.1
RFFLQ8WZ73 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.19■■■□□ 2.1
RFFLQ8WZ73 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFFLQ8WZ73 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
RFFLQ8WZ73 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RFFLQ8WZ73 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
RFFLQ8WZ73 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RFFLQ8WZ73 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.17■■■□□ 2.1
RFFLQ8WZ73 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RFFLQ8WZ73 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.17■■■□□ 2.1
RFFLQ8WZ73 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RFFLQ8WZ73 AL133380.1-201ENST00000506013 324 ntBASIC28.16■■■□□ 2.1
RFFLQ8WZ73 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
RFFLQ8WZ73 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
RFFLQ8WZ73 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
RFFLQ8WZ73 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.13■■■□□ 2.09
RFFLQ8WZ73 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RFFLQ8WZ73 RARRES2P7-201ENST00000567349 469 ntBASIC28.12■■■□□ 2.09
RFFLQ8WZ73 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
RFFLQ8WZ73 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.11■■■□□ 2.09
RFFLQ8WZ73 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RFFLQ8WZ73 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RFFLQ8WZ73 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
RFFLQ8WZ73 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.11■■■□□ 2.09
RFFLQ8WZ73 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RFFLQ8WZ73 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RFFLQ8WZ73 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RFFLQ8WZ73 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFFLQ8WZ73 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
RFFLQ8WZ73 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RFFLQ8WZ73 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.08■■■□□ 2.09
RFFLQ8WZ73 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.07■■■□□ 2.08
RFFLQ8WZ73 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.07■■■□□ 2.08
RFFLQ8WZ73 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.07■■■□□ 2.08
RFFLQ8WZ73 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
RFFLQ8WZ73 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RFFLQ8WZ73 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RFFLQ8WZ73 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.02■■■□□ 2.08
RFFLQ8WZ73 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RFFLQ8WZ73 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RFFLQ8WZ73 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28■■■□□ 2.07
RFFLQ8WZ73 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RFFLQ8WZ73 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RFFLQ8WZ73 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
RFFLQ8WZ73 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RFFLQ8WZ73 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFFLQ8WZ73 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFFLQ8WZ73 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RFFLQ8WZ73 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RFFLQ8WZ73 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RFFLQ8WZ73 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.94■■■□□ 2.06
RFFLQ8WZ73 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RFFLQ8WZ73 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RFFLQ8WZ73 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RFFLQ8WZ73 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
RFFLQ8WZ73 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
RFFLQ8WZ73 AC097358.2-201ENST00000607541 1159 ntBASIC27.92■■■□□ 2.06
RFFLQ8WZ73 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RFFLQ8WZ73 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RFFLQ8WZ73 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RFFLQ8WZ73 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.91■■■□□ 2.06
RFFLQ8WZ73 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RFFLQ8WZ73 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.9■■■□□ 2.06
RFFLQ8WZ73 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RFFLQ8WZ73 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
RFFLQ8WZ73 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RFFLQ8WZ73 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
RFFLQ8WZ73 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
RFFLQ8WZ73 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
RFFLQ8WZ73 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.87■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms